Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 AC100812.1-201ENST00000607622 580 ntBASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PARPBPQ9NWS1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 RNU1-14P-201ENST00000362759 152 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 RNY3P11-201ENST00000364153 102 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 DEFB109C-201ENST00000382575 264 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 DEFB109B-201ENST00000382656 264 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 Y_RNA.447-201ENST00000384184 113 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 RNU6-45P-201ENST00000384471 107 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 MIR124-3-201ENST00000384866 87 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 SNORD66.1-201ENST00000391230 76 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 RN7SKP167-201ENST00000411047 285 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 RPL23AP26-201ENST00000412728 464 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AL160275.3-201ENST00000423876 471 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 HMGB1P9-201ENST00000429856 646 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 RPS24P6-201ENST00000452670 400 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AC112492.4-201ENST00000456549 352 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 RPL9P32-201ENST00000464118 620 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 RPS23P7-201ENST00000466210 444 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 UQCRHP4-201ENST00000471686 272 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AC091167.1-201ENST00000492017 396 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AC026979.1-201ENST00000492525 396 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AC114801.2-201ENST00000503825 781 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AC022447.4-201ENST00000504053 364 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AC008958.1-201ENST00000511047 682 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AC026801.2-201ENST00000515352 425 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 RNA5SP49-201ENST00000516450 115 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 RNA5SP309-201ENST00000516670 106 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 RN7SKP82-201ENST00000516786 223 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 IGLV3-26-201ENST00000520756 302 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AC104576.1-201ENST00000524225 88 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AC008489.1-201ENST00000524271 483 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AL512605.2-201ENST00000592972 256 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AL365434.2-201ENST00000607979 234 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 MIR3653-201ENST00000625572 110 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AL606534.2-204ENST00000635008 178 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AL137003.2-201ENST00000606924 2538 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 SAGE2P-201ENST00000420011 2126 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 AC116667.1-201ENST00000604855 2072 ntBASIC3.79□□□□□ -1.8
PARPBPQ9NWS1 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 Y_RNA.48-201ENST00000362710 103 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 Y_RNA.222-201ENST00000364264 102 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 RNU1-132P-201ENST00000364300 164 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 RNU6-472P-201ENST00000384299 107 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 Y_RNA.556-201ENST00000384677 113 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 MIR517A-201ENST00000385001 87 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 SNORD73A-201ENST00000386062 65 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 Y_RNA.625-201ENST00000411256 107 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 RPS15AP10-201ENST00000432472 382 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 AC004866.2-201ENST00000438285 481 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 HSFY6P-201ENST00000445573 403 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 TPT1P12-201ENST00000448968 492 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 RPS11P1-201ENST00000451072 473 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 AC109327.1-201ENST00000471666 403 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 RPS29P19-201ENST00000479709 171 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 RPS26P15-201ENST00000488067 348 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 HSBP1P1-201ENST00000555205 166 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 MIR7702-201ENST00000621931 59 ntBASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
PARPBPQ9NWS1 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.78□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms