Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 SUB1P3-201ENST00000564581 315 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 MIR3176-201ENST00000582210 90 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 CLIC4P2-201ENST00000601934 717 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC108479.2-201ENST00000617314 601 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC097655.1-201ENST00000635075 318 ntBASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC0.91□□□□□ -2.26
CDC42SE1Q9NRR8 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.26
CDC42SE1Q9NRR8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC0.9□□□□□ -2.26
CDC42SE1Q9NRR8 AL121657.1-201ENST00000327215 531 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 MIR372-201ENST00000362225 67 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 MIR26B-201ENST00000362251 77 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 RNU1-112P-201ENST00000364401 164 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 snoZ40.1-201ENST00000364540 72 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 RNU6-398P-201ENST00000384143 109 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 EIF1AXP1-201ENST00000419267 435 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 BX510359.4-201ENST00000423750 193 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 UBE2V1P4-201ENST00000425374 344 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC087499.2-201ENST00000432861 149 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC018634.1-201ENST00000437554 401 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 RPS29P7-201ENST00000439662 171 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC005094.1-201ENST00000440420 368 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AL441985.1-201ENST00000457727 251 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 CAB39P1-201ENST00000502277 460 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 RPF2P2-201ENST00000504693 896 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC026427.2-201ENST00000506228 536 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC117522.2-201ENST00000510049 657 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 SNORA44.1-201ENST00000517031 108 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 RNU6-667P-201ENST00000517186 102 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC023632.4-201ENST00000517783 191 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 IGHVII-60-1-201ENST00000519079 256 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 COPS8P3-201ENST00000526024 482 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC007375.1-201ENST00000554513 578 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC136619.2-201ENST00000563361 631 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 MIR4480-201ENST00000582492 71 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC010900.2-201ENST00000604508 210 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC107952.2-201ENST00000606048 486 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC103810.6-201ENST00000606708 136 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AL354696.1-201ENST00000614652 497 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC008121.3-201ENST00000618726 433 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC231657.1-201ENST00000624313 397 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC099654.9-201ENST00000637055 678 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 ATM-228ENST00000639240 498 ntTSL 5 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC006927.2-201ENST00000639256 389 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 ATM-230ENST00000640388 578 ntTSL 5 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 AC006020.1-201ENST00000420179 1854 ntBASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
CDC42SE1Q9NRR8 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 ZNF29P-201ENST00000225587 168 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 SNORA63.1-201ENST00000362493 131 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 RNU6-1164P-201ENST00000364428 107 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 RNU6-1280P-201ENST00000365211 107 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 RNA5SP283-201ENST00000365604 119 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 MIR1302-8-201ENST00000408342 128 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 RNA5SP501-201ENST00000410990 112 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 TEX41-202ENST00000414256 604 ntTSL 5 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AL672167.3-201ENST00000465951 960 ntBASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.89□□□□□ -2.27
CDC42SE1Q9NRR8 AC023194.1-201ENST00000493084 308 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms