Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 EIF4E2P1-201ENST00000393781 255 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 HLFP1-201ENST00000402375 499 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 Y_RNA.615-201ENST00000410769 117 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 MTND3P8-201ENST00000412909 339 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.13□□□□□ -1.75
VTA1Q9NP79 FTH1P6-201ENST00000430768 320 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.13□□□□□ -1.75
VTA1Q9NP79 RPS15AP27-201ENST00000449183 343 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.13□□□□□ -1.75
VTA1Q9NP79 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.13□□□□□ -1.75
VTA1Q9NP79 AL590639.1-201ENST00000456484 337 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.13□□□□□ -1.75
VTA1Q9NP79 FGF7P4-201ENST00000509595 295 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 RNU6-507P-201ENST00000516045 100 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 Y_RNA.665-201ENST00000516177 98 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 SNORA74D-201ENST00000516404 141 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 AC007458.1-201ENST00000542812 373 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.13□□□□□ -1.75
VTA1Q9NP79 AC037471.2-201ENST00000564941 598 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 AC007687.1-201ENST00000602704 304 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.13□□□□□ -1.75
VTA1Q9NP79 MIR7851-201ENST00000610611 160 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 AC103705.1-201ENST00000619013 241 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 MTND1P37-201ENST00000636562 264 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 HSPA8P1-201ENST00000425843 1833 ntBASIC4.13□□□□□ -1.75
VTA1Q9NP79 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VTA1Q9NP79 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VTA1Q9NP79 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
VTA1Q9NP79 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VTA1Q9NP79 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VTA1Q9NP79 SNORD113-7-201ENST00000363762 77 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 RNA5SP267-201ENST00000364893 126 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 MIR490-201ENST00000384865 128 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 RNU2-37P-201ENST00000410695 177 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 POLHP1-201ENST00000411806 470 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 AC092809.3-201ENST00000415453 231 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.12□□□□□ -1.75
VTA1Q9NP79 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 AC097713.2-201ENST00000430199 356 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.12□□□□□ -1.75
VTA1Q9NP79 HMGB3P22-202ENST00000451823 572 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 RBMY2UP-201ENST00000453474 324 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 RNU7-167P-201ENST00000459160 62 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 RPS4XP13-201ENST00000483219 789 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 RPL30P5-201ENST00000494923 336 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 HIGD1AP13-201ENST00000509878 289 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.12□□□□□ -1.75
VTA1Q9NP79 RNU6-189P-201ENST00000516120 101 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.12□□□□□ -1.75
VTA1Q9NP79 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.12□□□□□ -1.75
VTA1Q9NP79 MIR5195-201ENST00000583555 115 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 AC098826.3-201ENST00000603823 466 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 AL161798.1-201ENST00000604630 131 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 AC009233.1-201ENST00000616477 371 ntBASIC4.12□□□□□ -1.75
VTA1Q9NP79 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VTA1Q9NP79 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
VTA1Q9NP79 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VTA1Q9NP79 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.12□□□□□ -1.75
VTA1Q9NP79 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VTA1Q9NP79 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC118273.1-201ENST00000525324 3006 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
VTA1Q9NP79 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 Y_RNA.373-201ENST00000365600 103 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 DEFB109C-201ENST00000382575 264 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 DEFB109B-201ENST00000382656 264 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 Y_RNA.480-201ENST00000384364 102 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 SNORD70.1-201ENST00000391007 85 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 HSPE1P26-201ENST00000405341 275 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 AL158156.1-201ENST00000422509 473 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC087650.1-201ENST00000431445 468 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 MTND3P23-201ENST00000431980 347 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 NDUFA5P4-201ENST00000436704 385 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 CCDC34P1-201ENST00000507441 517 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC026784.1-201ENST00000507986 352 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 RNU1-61P-201ENST00000516107 151 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 RNU6-1282P-201ENST00000516735 96 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 RPL7P20-201ENST00000520308 745 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC008011.1-201ENST00000545989 227 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 TRAV28-201ENST00000557548 323 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC005668.1-201ENST00000571142 476 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 MIR1273C-201ENST00000578669 77 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 MIR3200-201ENST00000580767 85 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC106900.2-201ENST00000604994 317 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 AL442067.2-201ENST00000614033 363 ntBASIC4.11□□□□□ -1.75
VTA1Q9NP79 AC048347.1-201ENST00000624621 427 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms