Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 RNU1-72P-201ENST00000362976 153 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 MIR888-201ENST00000401186 77 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 U6atac.2-201ENST00000408644 118 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 ZNF863P-201ENST00000426746 417 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AL512661.1-201ENST00000434586 1253 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AL592447.1-201ENST00000447592 540 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AL163540.1-201ENST00000485382 386 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AC034222.1-201ENST00000494052 532 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 RNA5SP61-201ENST00000516453 100 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 DUXAP1-201ENST00000556632 463 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AC106052.1-201ENST00000608029 497 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AC091304.6-201ENST00000619761 202 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 AL590396.4-201ENST00000636779 956 ntBASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.25□□□□□ -2.21
KIAA1549Q9HCM3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 RNU6-582P-201ENST00000362989 107 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 RNU6-650P-201ENST00000365658 111 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 MIR1287-201ENST00000408492 90 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 SNORD56-201ENST00000413522 71 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 AL136133.1-201ENST00000413694 376 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 MTCO3P1-205ENST00000422088 832 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 GTF2IP20-201ENST00000431663 360 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 MTND4LP7-201ENST00000431728 294 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 AC027575.1-201ENST00000481064 460 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 RPL36AP21-201ENST00000490372 323 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 SUMO2P6-201ENST00000505273 288 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 SCARNA15.2-201ENST00000516409 127 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 AGGF1P5-201ENST00000567900 919 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 MIR3122-201ENST00000577243 73 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 SEPT7P9-203ENST00000604116 343 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 AC007349.4-201ENST00000608114 532 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 AC004908.2-201ENST00000609090 574 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 AC109454.4-201ENST00000623411 649 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 AC010889.1-201ENST00000566193 2666 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 AC005832.2-201ENST00000538921 1430 ntBASIC1.24□□□□□ -2.21
KIAA1549Q9HCM3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 RNU6-115P-201ENST00000364310 107 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 RNU6-1078P-201ENST00000364522 103 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 RNU6-392P-201ENST00000364926 101 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 SNORA25.9-201ENST00000365087 128 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 SNORA67.6-201ENST00000391093 99 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AL356131.1-201ENST00000405826 414 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC009237.2-201ENST00000421358 284 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 FAM204CP-201ENST00000424489 642 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 VN1R42P-201ENST00000424651 344 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC016691.1-201ENST00000441321 413 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 RFC5P1-201ENST00000454419 874 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 RPL26P9-201ENST00000457466 433 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC023824.3-201ENST00000569003 562 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AL355802.4-201ENST00000607635 548 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC091932.3-201ENST00000624223 323 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 MTND5P10-201ENST00000603719 1809 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 MIR514A1-201ENST00000385133 98 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 SNORA40.19-201ENST00000390846 128 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 MIR1276-201ENST00000408707 83 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 NANOGP2-201ENST00000435391 727 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 KLF3P2-201ENST00000465138 268 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 COX6CP14-201ENST00000469580 174 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC093801.2-201ENST00000503966 1050 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 MIR892C-201ENST00000516410 77 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 RNU6-885P-201ENST00000516607 104 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 RNU6-928P-201ENST00000516876 104 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 WISP1-OT1-201ENST00000602893 642 ntBASIC1.23□□□□□ -2.21
KIAA1549Q9HCM3 AC091946.2-201ENST00000606105 291 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms