Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AP003122.6-201ENST00000623831 495 ntBASIC0.71□□□□□ -2.3
CHD8Q9HCK8 AL118508.4-201ENST00000624142 1176 ntBASIC0.71□□□□□ -2.3
CHD8Q9HCK8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
CHD8Q9HCK8 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 RNU6-335P-201ENST00000364563 113 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 MIR17-201ENST00000385012 84 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 MIR607-201ENST00000385241 96 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 MIR320B1-201ENST00000390209 79 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 MIR767-201ENST00000390228 109 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 AC096632.1-201ENST00000427395 310 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.7□□□□□ -2.3
CHD8Q9HCK8 AC025768.1-201ENST00000510057 267 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 AP004247.1-201ENST00000531556 1289 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 AC023824.2-201ENST00000566185 400 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 AC140725.3-201ENST00000616193 880 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 AL138880.2-201ENST00000616214 239 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 MTND5P11-201ENST00000511037 1812 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 RNU6-733P-201ENST00000410759 104 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 AL356867.1-201ENST00000429623 299 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.7□□□□□ -2.3
CHD8Q9HCK8 OSTCP8-201ENST00000445117 448 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 HMGN2P10-201ENST00000448085 265 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.7□□□□□ -2.3
CHD8Q9HCK8 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.7□□□□□ -2.3
CHD8Q9HCK8 AL513343.1-201ENST00000451818 792 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.7□□□□□ -2.3
CHD8Q9HCK8 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.7□□□□□ -2.3
CHD8Q9HCK8 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.7□□□□□ -2.3
CHD8Q9HCK8 AC007275.1-201ENST00000621243 671 ntBASIC0.7□□□□□ -2.3
CHD8Q9HCK8 MIR524-201ENST00000385242 87 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 RNU6-955P-201ENST00000410497 104 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 RPL21P66-201ENST00000426566 466 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC0.69□□□□□ -2.3
CHD8Q9HCK8 RNU7-26P-201ENST00000458980 63 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AC005908.1-201ENST00000468701 347 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AL121769.1-201ENST00000469473 401 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AC069304.3-201ENST00000603938 1084 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AL133507.1-201ENST00000605269 557 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AC020923.1-201ENST00000624021 917 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CHD8Q9HCK8 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
CHD8Q9HCK8 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 XKRYP1-201ENST00000423438 492 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 MTCO3P46-201ENST00000425787 232 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 USP12PX-201ENST00000432383 1057 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 XKRYP2-201ENST00000432915 492 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AL353689.1-201ENST00000438895 199 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.69□□□□□ -2.3
CHD8Q9HCK8 RNA5SP134-201ENST00000516492 96 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AP000811.1-201ENST00000603803 651 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 AL590282.1-201ENST00000610379 1136 ntBASIC0.69□□□□□ -2.3
CHD8Q9HCK8 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CHD8Q9HCK8 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CHD8Q9HCK8 CIR1P3-201ENST00000405137 479 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.68□□□□□ -2.3
CHD8Q9HCK8 RNU7-27P-201ENST00000459281 62 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AL135752.1-201ENST00000479477 471 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AC105252.1-201ENST00000503089 286 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AP005902.1-201ENST00000521358 186 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AC083923.1-201ENST00000523708 376 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.68□□□□□ -2.3
CHD8Q9HCK8 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AC008749.1-201ENST00000597650 306 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AC113368.1-201ENST00000603736 382 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 U8.14-201ENST00000390843 143 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 SNORD56-201ENST00000413522 71 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AC010301.1-201ENST00000473936 355 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 MRPS33P3-201ENST00000513456 322 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 SNORA31.25-201ENST00000517242 134 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 CYP4A27P-201ENST00000567218 190 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 AC135178.6-201ENST00000605314 398 ntBASIC0.68□□□□□ -2.3
CHD8Q9HCK8 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
CHD8Q9HCK8 RNU6-600P-201ENST00000362524 99 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 SNORA23-201ENST00000365128 182 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 RPS20P15-201ENST00000412792 311 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.67□□□□□ -2.3
CHD8Q9HCK8 SNRPEP4-201ENST00000435815 279 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CHD8Q9HCK8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC0.67□□□□□ -2.3
CHD8Q9HCK8 AC087588.1-201ENST00000462203 316 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CHD8Q9HCK8 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC0.67□□□□□ -2.3
CHD8Q9HCK8 RNU6-229P-201ENST00000516614 102 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 SNRPGP16-201ENST00000533275 226 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 AC022662.1-201ENST00000580252 331 ntBASIC0.67□□□□□ -2.3
CHD8Q9HCK8 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC0.67□□□□□ -2.3
CHD8Q9HCK8 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms