Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RPL23AP11-201ENST00000475260 469 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 RPL23AP55-201ENST00000498163 452 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 MTCO3P9-201ENST00000506989 781 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 LRRC34P2-201ENST00000514850 553 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 SNORA74D-201ENST00000516404 141 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 SNORA70.18-201ENST00000516696 98 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 RNU6-685P-201ENST00000517088 95 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AC011712.1-201ENST00000588959 234 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AC012531.5-201ENST00000611375 151 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AL365204.3-201ENST00000612448 685 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AL136221.1-201ENST00000621449 509 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AC091953.5-201ENST00000622919 233 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 U6.114-201ENST00000636407 96 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AC100810.6-201ENST00000638068 285 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 ZNF826P-207ENST00000622273 1910 ntBASIC3.62□□□□□ -1.83
USP29Q9HBJ7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
USP29Q9HBJ7 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC032011.1-201ENST00000611703 1549 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 MIR30E-201ENST00000362104 92 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 RNU6-845P-201ENST00000362578 103 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 RNU6-522P-201ENST00000364497 107 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 RNU6-767P-201ENST00000384132 107 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AL139397.2-201ENST00000404529 772 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AL162578.1-201ENST00000406202 378 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 PDCL2P1-201ENST00000419302 352 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AL158156.1-201ENST00000422509 473 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC091390.3-201ENST00000426478 338 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 RPL7L1P10-201ENST00000427790 463 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 ERLEC1P1-201ENST00000433806 578 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 HMGB1P12-201ENST00000438594 598 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AL357552.1-201ENST00000445254 415 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC092001.1-201ENST00000453012 261 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 RN7SL601P-201ENST00000471221 293 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 VN1R104P-201ENST00000505115 1009 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 MLLT10P2-201ENST00000506434 249 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC104806.1-201ENST00000508720 308 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 SNORA31.8-201ENST00000516327 108 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC011602.1-201ENST00000546484 331 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 TGIF1P1-201ENST00000558095 802 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 ZNF192P1-203ENST00000565888 810 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC174048.1-201ENST00000603389 144 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 DPPA3P3-201ENST00000603842 430 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AC021646.1-201ENST00000605469 484 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 AP003355.3-201ENST00000623465 114 ntBASIC3.61□□□□□ -1.83
USP29Q9HBJ7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
USP29Q9HBJ7 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AC093010.3-201ENST00000570269 15214 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 FRG1CP-201ENST00000358464 769 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 RNA5SP50-201ENST00000363731 107 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 RNU6-173P-201ENST00000364215 104 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 Y_RNA.263-201ENST00000364659 114 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AP002088.1-201ENST00000382740 395 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 RNU6-550P-201ENST00000391057 101 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AL606923.1-201ENST00000406616 190 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 Y_RNA.615-201ENST00000410769 117 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AL645937.1-202ENST00000421799 937 ntBASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.6□□□□□ -1.83
USP29Q9HBJ7 AC008850.1-201ENST00000427546 362 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms