Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 AL359198.2-201ENST00000611836 194 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 AL365204.3-201ENST00000612448 685 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 AL162274.2-201ENST00000614406 332 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 AC009090.3-201ENST00000616553 565 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 AC136475.10-201ENST00000620253 385 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 U2.21-201ENST00000637295 81 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 MTND5P42-201ENST00000637720 498 ntBASIC2.52□□□□□ -2.01
ELL3Q9HB65 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ELL3Q9HB65 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
ELL3Q9HB65 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ELL3Q9HB65 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
ELL3Q9HB65 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.52□□□□□ -2.01
ELL3Q9HB65 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
ELL3Q9HB65 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 HSPE1P11-201ENST00000339579 310 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 MIR422A-201ENST00000362286 90 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 SNORA71.1-201ENST00000364523 117 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 SNORA4.3-201ENST00000365564 137 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 MIR491-201ENST00000384877 84 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 MIR558-201ENST00000384920 94 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 SNORA11.1-201ENST00000408133 129 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 RPS12P24-201ENST00000412619 387 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 RPL7P10-201ENST00000417407 739 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC009414.1-201ENST00000427200 443 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC104651.1-201ENST00000427559 735 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 SAR1AP4-201ENST00000429225 591 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC104332.2-201ENST00000429959 156 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 USP9YP14-201ENST00000430663 563 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC073614.1-201ENST00000438690 650 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 RPS3AP12-201ENST00000443616 753 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 RPL37P4-201ENST00000448908 268 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 GSTA11P-201ENST00000452866 669 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 KLF3P2-201ENST00000465138 268 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 MTND4LP3-201ENST00000468320 276 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 Vault.3-201ENST00000516676 95 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 RNA5SP165-201ENST00000517142 115 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 AP000873.5-201ENST00000533906 236 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC008498.1-201ENST00000613012 531 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC007998.5-201ENST00000622938 237 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 AC068880.5-201ENST00000624331 290 ntBASIC2.51□□□□□ -2.01
ELL3Q9HB65 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.51□□□□□ -2.01
ELL3Q9HB65 FAM35BP-202ENST00000497389 3337 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.5□□□□□ -2.01
ELL3Q9HB65 Y_RNA.534-201ENST00000384599 112 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 MIR181A2-201ENST00000384863 110 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.5□□□□□ -2.01
ELL3Q9HB65 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.5□□□□□ -2.01
ELL3Q9HB65 VN1R108P-201ENST00000431580 830 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 AL358934.1-201ENST00000432346 324 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 SNRPEP9-201ENST00000436794 238 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 MTND4P25-201ENST00000441039 533 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 KATNBL1P3-201ENST00000443475 909 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.5□□□□□ -2.01
ELL3Q9HB65 MTCO2P18-201ENST00000457151 658 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 RPS29P12-201ENST00000460178 152 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 MRPS17P3-201ENST00000465453 385 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 RPL27AP5-201ENST00000469428 449 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 AC117440.1-201ENST00000474107 571 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 ARL4AP2-201ENST00000507378 601 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.5□□□□□ -2.01
ELL3Q9HB65 RNU7-51P-201ENST00000516560 62 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 Y_RNA.689-201ENST00000516589 107 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 RNU6-56P-201ENST00000516986 93 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.5□□□□□ -2.01
ELL3Q9HB65 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
ELL3Q9HB65 AC011979.2-201ENST00000527568 352 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 AC087883.1-201ENST00000551882 391 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.5□□□□□ -2.01
ELL3Q9HB65 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.5□□□□□ -2.01
ELL3Q9HB65 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.5□□□□□ -2.01
ELL3Q9HB65 H3F3AP1-201ENST00000559984 334 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.5□□□□□ -2.01
ELL3Q9HB65 MTND1P15-201ENST00000579262 949 ntBASIC2.5□□□□□ -2.01
ELL3Q9HB65 MIR3200-201ENST00000580767 85 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms