Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-371P-201ENST00000364283 108 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 SNORD116-11-201ENST00000383882 92 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-1297P-201ENST00000384415 104 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AL139397.2-201ENST00000404529 772 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 RN7SKP177-201ENST00000410567 355 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 RNU4-14P-201ENST00000410858 122 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 RPL37P10-201ENST00000412884 288 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 EI24P1-201ENST00000416584 867 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AF228730.4-201ENST00000421457 183 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 RPL23AP69-201ENST00000431134 458 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AC087588.1-201ENST00000462203 316 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 VN1R17P-201ENST00000472048 1090 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AC092451.1-201ENST00000480211 153 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 RN7SKP24-201ENST00000515888 284 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 SNORA14.1-201ENST00000516113 141 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.718-201ENST00000517110 102 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 IGKV2D-23-201ENST00000518179 286 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AP005597.4-201ENST00000526762 229 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AC090877.1-201ENST00000561418 344 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 MIR4790-201ENST00000577799 79 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AL160281.1-201ENST00000605307 311 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 MIR6868-201ENST00000611215 58 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AL355810.1-201ENST00000614629 552 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 U7.8-201ENST00000619968 63 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AL359757.2-201ENST00000624309 274 ntBASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
AMBRA1Q9C0C7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.138-201ENST00000363462 102 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-45P-201ENST00000384471 107 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 MIR514A1-201ENST00000385133 98 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 HLFP1-201ENST00000402375 499 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 RPS4XP7-201ENST00000406274 780 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 RN7SKP158-201ENST00000410453 326 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 RPLP0P7-201ENST00000416050 667 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AL139396.1-201ENST00000421137 167 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AL353729.1-201ENST00000425044 720 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AC002075.2-201ENST00000425207 252 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AL117339.2-201ENST00000430475 180 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 FABP5P14-201ENST00000437273 393 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AC008264.1-201ENST00000447612 367 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 HMGB3P30-201ENST00000457863 606 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 RPL21P41-201ENST00000459863 264 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AC012181.1-201ENST00000479895 423 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AL049874.1-201ENST00000489560 388 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 RPS27P27-201ENST00000498779 255 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-1170P-201ENST00000515974 106 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-1069P-201ENST00000516612 133 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-914P-201ENST00000516749 109 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 MIR5692C1-201ENST00000585309 91 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AC023043.2-201ENST00000589678 1026 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AC084781.2-201ENST00000615568 161 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AC084757.4-201ENST00000616350 526 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AC022418.1-201ENST00000624118 445 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 AC112200.1-201ENST00000625015 234 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 MTND4LP32-201ENST00000636111 270 ntBASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.63□□□□□ -1.83
AMBRA1Q9C0C7 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 UBE2L2-201ENST00000254302 429 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.326-201ENST00000365176 113 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 RNA5SP283-201ENST00000365604 119 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 RNU6-43P-201ENST00000384302 107 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 MIR449B-201ENST00000384995 97 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 Y_RNA.579-201ENST00000390939 94 ntBASIC3.62□□□□□ -1.83
AMBRA1Q9C0C7 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms