Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRFN3Q9BTN0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 ZNF807-201ENST00000328088 1707 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AL139276.1-201ENST00000311910 1001 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 Y_RNA.231-201ENST00000364358 102 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 RNU6-741P-201ENST00000383889 107 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 Y_RNA.459-201ENST00000384251 102 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 RNU6-463P-201ENST00000384340 107 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 MIR1179-201ENST00000408703 91 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 SNORA3C-201ENST00000408792 125 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 MTCO2P27-201ENST00000420740 428 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 HSPE1P1-201ENST00000421494 318 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AL358472.1-201ENST00000431295 329 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 SNRPFP3-201ENST00000457792 225 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 RPL23AP11-201ENST00000475260 469 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AL163540.1-201ENST00000485382 386 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AC005741.1-201ENST00000511094 432 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 RNU1-61P-201ENST00000516107 151 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 RNU6-1046P-201ENST00000516538 107 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 RNU6-1256P-201ENST00000516539 103 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 RN7SKP219-201ENST00000516825 296 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 RNU6-143P-201ENST00000516942 93 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 NARSP2-201ENST00000518524 679 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 POLR3GP2-201ENST00000588366 668 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 DPPA3P3-201ENST00000603842 430 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AC007619.2-201ENST00000605743 379 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 RNU6-89P-201ENST00000606519 100 ntBASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC3.96□□□□□ -1.78
LRFN3Q9BTN0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AC018529.3-201ENST00000624212 2254 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 RNU4-20P-201ENST00000365601 151 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 SNORD116-29-201ENST00000384516 83 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 Y_RNA.576-201ENST00000384781 102 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 MIR514A2-201ENST00000385131 88 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 MIR514A3-201ENST00000385132 88 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 U3.19-201ENST00000390893 196 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 RPL23AP48-201ENST00000406913 488 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 MIR1261-201ENST00000408659 82 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 RNA5SP146-201ENST00000410743 123 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AC245054.2-201ENST00000415639 319 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 BX842559.1-201ENST00000419615 532 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 Z74021.1-201ENST00000423610 407 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 RPL21P91-201ENST00000429231 479 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 ERLEC1P1-201ENST00000433806 578 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AC009237.8-201ENST00000445492 379 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 RPL31P60-201ENST00000478450 367 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AL160314.1-201ENST00000490836 438 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 RPL29P14-201ENST00000495837 428 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AC021146.2-201ENST00000504736 556 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AC091885.1-201ENST00000506658 268 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 RNU4-29P-201ENST00000515943 174 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 RNU6-559P-201ENST00000516151 98 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 RNU6-685P-201ENST00000517088 95 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 Y_RNA.718-201ENST00000517110 102 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 MYL12AP1-201ENST00000518490 515 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AC069240.1-201ENST00000548774 375 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AL138889.2-201ENST00000603883 242 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AC124303.1-201ENST00000605703 360 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 RNU1-30P-201ENST00000606575 163 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AC004825.2-201ENST00000616634 455 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 MTND4LP32-201ENST00000636111 270 ntBASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
LRFN3Q9BTN0 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms