Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AC006028.1-201ENST00000438379 402 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 PIGFP3-201ENST00000441918 722 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AC087588.1-201ENST00000462203 316 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 RPL39P36-201ENST00000490784 156 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AL160314.1-201ENST00000490836 438 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AC117522.3-201ENST00000507974 584 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 TTC39CP1-201ENST00000512513 755 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 RNU1-61P-201ENST00000516107 151 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 RNA5SP290-201ENST00000517133 127 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 SUB1P1-201ENST00000524415 382 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 HIGD1AP1-201ENST00000550979 275 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AC010525.2-201ENST00000590920 195 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AP001486.3-201ENST00000615334 372 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AC090132.2-201ENST00000615881 347 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 U6.42-201ENST00000618440 107 ntBASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
PAAF1Q9BRP4 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 MAPK10-373ENST00000641983 6772 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 RNU6-741P-201ENST00000383889 107 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 RNU6-1197P-201ENST00000391183 107 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 RNA5SP118-201ENST00000410385 109 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC126124.2-201ENST00000413542 321 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC092573.2-201ENST00000434546 243 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 MTATP6P23-201ENST00000440153 476 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 MTCO3P18-201ENST00000440206 761 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC008264.1-201ENST00000447612 367 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC006445.1-201ENST00000491925 405 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC110794.1-201ENST00000505816 425 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC074344.1-201ENST00000512823 224 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 MTND4P7-201ENST00000523876 130 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AF235103.2-201ENST00000525753 346 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AP005435.4-201ENST00000529514 284 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC015917.1-201ENST00000579654 510 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC098826.3-201ENST00000603823 466 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC013553.2-201ENST00000604244 589 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC073657.2-201ENST00000605661 303 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 AC103710.2-202ENST00000641454 2853 ntBASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PAAF1Q9BRP4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 Y_RNA.245-201ENST00000364493 95 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 AL139039.1-201ENST00000401900 692 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 TMEM167AP1-201ENST00000423409 219 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 TAAR7P-201ENST00000436141 242 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 AC104058.1-201ENST00000448028 297 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 MTND3P10-201ENST00000450967 341 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 MTND3P16-201ENST00000452205 344 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 HMGN2P16-201ENST00000456802 261 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 RPL7P5-201ENST00000471472 736 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 KC877373.1-201ENST00000479066 408 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 RPL38P4-201ENST00000502376 214 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 RNA5SP471-201ENST00000516971 106 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 AC060780.3-201ENST00000589464 80 ntBASIC3.51□□□□□ -1.85
PAAF1Q9BRP4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms