Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 MTND1P30-201ENST00000441241 901 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 IPO7P1-201ENST00000442031 636 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 MTCO3P45-201ENST00000443036 613 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 USP9YP29-201ENST00000445112 563 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 SNRPGP9-201ENST00000456025 225 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AP1S2P1-201ENST00000457344 379 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC008481.1-201ENST00000463278 396 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 S100A11P2-201ENST00000467589 312 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 MTND1P3-201ENST00000484956 952 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LINC00477Q96M19 VN1R104P-201ENST00000505115 1009 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 FABP5P5-201ENST00000515537 406 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 Y_RNA.688-201ENST00000516565 95 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 RNU6-1282P-201ENST00000516735 96 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 RNU6-928P-201ENST00000516876 104 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 RNU2-46P-201ENST00000517038 113 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 BTF3P12-201ENST00000519620 469 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC103783.1-201ENST00000520506 373 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC007115.1-201ENST00000546853 234 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.95□□□□□ -2.1
LINC00477Q96M19 MIR3913-1-201ENST00000577744 102 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 MIR3146-201ENST00000580367 79 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 Z94722.1-201ENST00000604328 474 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC112187.2-201ENST00000604345 283 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC007619.2-201ENST00000605743 379 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC073114.1-201ENST00000612027 490 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 AC011890.2-201ENST00000613393 294 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 MIR6895-201ENST00000613497 78 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.95□□□□□ -2.1
LINC00477Q96M19 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC00477Q96M19 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 MIR6073-201ENST00000352083 89 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 U8.3-201ENST00000363321 132 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 RNU6-188P-201ENST00000364207 107 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 RNU1-112P-201ENST00000364401 164 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 RNY3P13-201ENST00000365542 102 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LINC00477Q96M19 RNU6-39P-201ENST00000384344 107 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 MIR128-1-201ENST00000384921 82 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 RPS3AP36-201ENST00000398190 775 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 AL359634.1-202ENST00000404721 284 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 SNORA11-201ENST00000408789 128 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 RPL21P24-201ENST00000413752 448 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AL451054.2-201ENST00000420896 202 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 NDUFB4P7-201ENST00000423198 363 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 AL353777.1-201ENST00000425552 326 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 AL590383.1-201ENST00000428602 75 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC104850.1-201ENST00000435940 476 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 TAAR7P-201ENST00000436141 242 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 MTCO2P16-201ENST00000436962 677 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 MTCO1P19-201ENST00000443487 500 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 AL592447.1-201ENST00000447592 540 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AL139109.1-201ENST00000455491 297 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 KC877373.1-201ENST00000479066 408 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 HMGB3P3-201ENST00000510526 400 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC096725.1-201ENST00000514266 313 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 RNU6-201P-201ENST00000517100 61 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC023824.2-201ENST00000566185 400 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AF038458.1-201ENST00000588406 262 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC112191.3-201ENST00000604371 277 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC104237.2-201ENST00000612456 443 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC093838.1-201ENST00000613014 469 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC010133.1-201ENST00000615809 842 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC006338.1-201ENST00000618453 749 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 AL137790.1-201ENST00000634283 177 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 Clostridiales-1.2-201ENST00000636724 160 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LINC00477Q96M19 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC00477Q96M19 MTND4P4-201ENST00000439033 1366 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 AC073346.2-201ENST00000624724 2058 ntBASIC1.94□□□□□ -2.1
LINC00477Q96M19 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC00477Q96M19 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms