Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 RNU6-339P-201ENST00000384310 107 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 Y_RNA.576-201ENST00000384781 102 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AL592114.1-201ENST00000403842 483 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 MIR548K-201ENST00000408406 116 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AC245054.2-201ENST00000415639 319 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 HSFY6P-201ENST00000445573 403 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AC020550.1-201ENST00000447385 163 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 SNORD97-201ENST00000459187 142 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 RPL39P5-202ENST00000512505 151 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AC108043.1-201ENST00000512696 574 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 RNU6-1092P-201ENST00000516955 87 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 Y_RNA.711-201ENST00000516993 102 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 HMGN1P28-201ENST00000521340 364 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AP000889.2-201ENST00000532684 490 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 OR4H12P-201ENST00000556269 907 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 MIR4293-201ENST00000584305 78 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AC008737.2-201ENST00000599446 118 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AC016925.2-201ENST00000605108 242 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AC012443.1-201ENST00000605605 231 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AC124303.1-201ENST00000605703 360 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AL121655.1-201ENST00000605811 308 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 Z82243.1-201ENST00000609432 473 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AC093838.1-201ENST00000613014 469 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 MIR8058-201ENST00000615737 89 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AP003355.3-201ENST00000623465 114 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 RNA5SP196-201ENST00000625967 102 ntBASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PDLIM2Q96JY6 AL359893.1-201ENST00000447628 1580 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 API5P2-201ENST00000397055 1498 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 GABPAP-201ENST00000419271 1356 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 Y_RNA.167-201ENST00000363735 109 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 SNORD113-7-201ENST00000363762 77 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 RNU6-960P-201ENST00000364056 120 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 RNA5SP479-201ENST00000364858 117 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 RPL37P10-201ENST00000412884 288 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 RPL30P3-201ENST00000424262 333 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 RPL7P46-201ENST00000425129 740 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AC093106.2-201ENST00000428212 385 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AL117339.2-201ENST00000430475 180 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AC005019.1-201ENST00000436455 431 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AL162151.2-201ENST00000448875 158 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 PPIAP3-201ENST00000450588 505 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 RPL9P32-201ENST00000464118 620 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 RN7SKP24-201ENST00000515888 284 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 RNA5SP217-201ENST00000515959 91 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 RNU6-566P-201ENST00000516790 107 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 IGKV2D-19-201ENST00000523346 262 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 APOOP3-201ENST00000536787 586 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AL163153.1-201ENST00000554223 283 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 MIR4790-201ENST00000577799 79 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AC006116.10-201ENST00000591836 581 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AL355812.1-201ENST00000603215 216 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 DPPA3P3-201ENST00000603842 430 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 U3.45-201ENST00000607547 219 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 MTND5P42-201ENST00000637720 498 ntBASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.8□□□□□ -1.8
PDLIM2Q96JY6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 Y_RNA.145-201ENST00000363527 102 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 Y_RNA.146-201ENST00000363549 102 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 RNA5SP283-201ENST00000365604 119 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 Y_RNA.459-201ENST00000384251 102 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 RNU6-754P-201ENST00000391166 107 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 AL109755.1-201ENST00000401791 649 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 RNU6-628P-201ENST00000410675 107 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 RNU6-370P-201ENST00000411008 104 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 Z99755.1-201ENST00000414048 380 ntBASIC3.79□□□□□ -1.8
PDLIM2Q96JY6 UBE2FP1-201ENST00000416536 447 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms