Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 CISD1P1-201ENST00000393907 327 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 RPLP0P7-201ENST00000416050 667 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 ATG3P1-201ENST00000419507 911 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 NDUFB1P1-201ENST00000435191 180 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 MTCO3P10-201ENST00000455912 772 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AC087884.1-201ENST00000469738 328 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AC117503.1-201ENST00000472241 394 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AC084198.1-201ENST00000477747 402 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AC110768.1-201ENST00000509222 400 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 RPL39P5-202ENST00000512505 151 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AC022634.1-201ENST00000520765 532 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 U2.17-201ENST00000611454 95 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AC103858.2-201ENST00000621471 543 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 MTND5P42-201ENST00000637720 498 ntBASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CHAMP1Q96JM3 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AL590704.1-201ENST00000402856 794 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AL139396.1-201ENST00000421137 167 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 RPL31P12-201ENST00000422587 358 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AL133547.1-201ENST00000448546 220 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AC009901.1-201ENST00000506703 541 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 MTCYBP40-201ENST00000509390 1135 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 TBCAP3-201ENST00000512475 312 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 RANP9-201ENST00000519957 271 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AC106782.4-201ENST00000568264 210 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AC005951.2-201ENST00000576282 495 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 MIR4513-201ENST00000581077 86 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AC053481.4-201ENST00000583164 216 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AL158032.1-201ENST00000605401 106 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AC019193.3-201ENST00000609144 554 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 SDR42E1P2-201ENST00000614861 481 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AL359547.2-201ENST00000615810 418 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AL355365.1-201ENST00000616480 294 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AC131238.1-201ENST00000617135 328 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 MIR8059-201ENST00000620427 81 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 MIR4275-201ENST00000636486 87 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 AC073346.2-201ENST00000624724 2058 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 MFSD8-236ENST00000641509 4050 ntBASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CHAMP1Q96JM3 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 RNA5SP502-201ENST00000362694 119 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 Y_RNA.145-201ENST00000363527 102 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 RNU6-434P-201ENST00000384376 107 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AL139039.1-201ENST00000401900 692 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AL591704.1-201ENST00000432574 275 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 RPL26P6-201ENST00000440913 438 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 SNRPGP18-201ENST00000553000 214 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AL121603.1-201ENST00000553815 142 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 MIR4458-201ENST00000578872 75 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 MIR3941-201ENST00000582572 103 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AC016925.2-201ENST00000605108 242 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 MIR6867-201ENST00000610636 67 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 AC006065.5-201ENST00000623427 349 ntBASIC4.44□□□□□ -1.7
CHAMP1Q96JM3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms