Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNU6-677P-201ENST00000516914 101 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.8□□□□□ -1.96
VMP1Q96GC9 AP003122.3-201ENST00000526316 255 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC084851.1-201ENST00000529105 249 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC107016.2-201ENST00000547968 190 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 LINC00933-203ENST00000559812 219 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC091489.2-201ENST00000566263 604 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
VMP1Q96GC9 MIR3118-1-201ENST00000581787 76 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 NRBF2P1-201ENST00000587407 859 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC174048.1-201ENST00000603389 144 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC093732.2-201ENST00000607950 274 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC103710.2-201ENST00000609912 942 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 BX664608.1-201ENST00000610519 487 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC135507.2-201ENST00000612443 309 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC005332.10-201ENST00000612725 619 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 MIR203B-201ENST00000636080 86 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 AC007671.2-201ENST00000637344 619 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
VMP1Q96GC9 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.8□□□□□ -1.96
VMP1Q96GC9 AL109809.4-201ENST00000603520 2185 ntBASIC2.8□□□□□ -1.96
VMP1Q96GC9 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
VMP1Q96GC9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VMP1Q96GC9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 RNU6-501P-201ENST00000364072 100 ntBASIC2.79□□□□□ -1.96
VMP1Q96GC9 FCF1P10-201ENST00000407590 479 ntBASIC2.79□□□□□ -1.96
VMP1Q96GC9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 AL591212.2-201ENST00000433923 257 ntBASIC2.79□□□□□ -1.96
VMP1Q96GC9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 AL139109.1-201ENST00000455491 297 ntBASIC2.79□□□□□ -1.96
VMP1Q96GC9 AC093899.1-201ENST00000457984 376 ntBASIC2.79□□□□□ -1.96
VMP1Q96GC9 AC133134.1-201ENST00000466800 359 ntBASIC2.79□□□□□ -1.96
VMP1Q96GC9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 AC117440.1-201ENST00000474107 571 ntBASIC2.79□□□□□ -1.96
VMP1Q96GC9 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 AC011825.1-201ENST00000484967 388 ntBASIC2.79□□□□□ -1.96
VMP1Q96GC9 RN7SL20P-201ENST00000488827 297 ntBASIC2.79□□□□□ -1.96
VMP1Q96GC9 RN7SL633P-201ENST00000488974 297 ntBASIC2.79□□□□□ -1.96
VMP1Q96GC9 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 RNA5SP112-201ENST00000515937 99 ntBASIC2.79□□□□□ -1.96
VMP1Q96GC9 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.79□□□□□ -1.96
VMP1Q96GC9 ATP5A1P2-202ENST00000616464 443 ntBASIC2.79□□□□□ -1.96
VMP1Q96GC9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VMP1Q96GC9 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.78□□□□□ -1.96
VMP1Q96GC9 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.78□□□□□ -1.96
VMP1Q96GC9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VMP1Q96GC9 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
VMP1Q96GC9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
VMP1Q96GC9 RNU6-486P-201ENST00000363116 107 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 RNU6-960P-201ENST00000364056 120 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 RNU6-1280P-201ENST00000365211 107 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VMP1Q96GC9 UBA52P6-201ENST00000399822 382 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 U6atac.2-201ENST00000408644 118 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 OR51A5P-201ENST00000415429 942 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 RPS15AP12-201ENST00000419498 388 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 AL109913.1-201ENST00000421173 514 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 RPL30P4-201ENST00000429309 333 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 AL139824.2-201ENST00000458731 1095 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 AP001324.2-201ENST00000461163 319 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.78□□□□□ -1.96
VMP1Q96GC9 SNORA3.4-201ENST00000515969 96 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 RNA5SP82-201ENST00000516707 92 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 RNU6-572P-201ENST00000516724 80 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC009902.1-201ENST00000519351 183 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC025755.1-201ENST00000521306 278 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 ZNF519P3-201ENST00000557158 1032 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC002400.1-201ENST00000569310 726 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC008751.2-201ENST00000597885 980 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC022893.3-201ENST00000607665 437 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.78□□□□□ -1.96
VMP1Q96GC9 MIR6134-201ENST00000617606 109 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC2.78□□□□□ -1.96
VMP1Q96GC9 AL356266.1-201ENST00000623311 483 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC091953.2-201ENST00000623979 160 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC092192.1-201ENST00000633154 1018 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 CU459211.1-201ENST00000635667 749 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 AC006927.3-201ENST00000638789 384 ntBASIC2.78□□□□□ -1.96
VMP1Q96GC9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
VMP1Q96GC9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.77□□□□□ -1.97
VMP1Q96GC9 AL445523.1-201ENST00000451184 1362 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 RNU6-533P-201ENST00000384144 107 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 RNU6-851P-201ENST00000384565 107 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 SNORD115.1-201ENST00000391109 76 ntBASIC2.77□□□□□ -1.97
VMP1Q96GC9 AC007560.1-201ENST00000426912 237 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms