Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 MIRLET7G-201ENST00000362280 84 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 Y_RNA.245-201ENST00000364493 95 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 AL079342.1-201ENST00000401460 267 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 AL023284.1-201ENST00000403956 276 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 MTND1P23-201ENST00000416931 372 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 MED14P1-201ENST00000430517 648 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 AL031313.1-201ENST00000448435 256 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 snoU109.3-201ENST00000459477 145 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 TRBV1-201ENST00000476502 284 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 AC104435.1-201ENST00000483483 166 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 MTCO2P15-201ENST00000532655 656 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 AL136981.2-201ENST00000617319 734 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 AC012640.5-201ENST00000623897 319 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 MIR219B-201ENST00000637023 88 ntBASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.14□□□□□ -2.07
ECHDC3Q96DC8 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 RNU6-1167P-201ENST00000363227 94 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 SNORA3A-201ENST00000364113 130 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 RNU4-68P-201ENST00000364314 141 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AL359634.1-202ENST00000404721 284 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 MIR320C1-201ENST00000408566 88 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 RPL17P12-201ENST00000413391 526 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 RPL21P24-201ENST00000413752 448 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 RPL26P27-201ENST00000414397 437 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AC083875.1-201ENST00000419509 405 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 OOSP1P1-201ENST00000423265 274 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 ISCA1P1-201ENST00000426679 387 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 Z98742.2-201ENST00000431564 187 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 SDR42E1P3-201ENST00000438345 502 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AC005094.1-201ENST00000440420 368 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 EXOSC3P1-201ENST00000448649 500 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 CECR9-201ENST00000453421 199 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 FABP5P15-201ENST00000453566 214 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AL049829.1-201ENST00000465411 156 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 SNORA31.3-201ENST00000516029 96 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 SNORA31.6-201ENST00000516241 130 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 LRRC37A5P-203ENST00000580181 585 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AC022662.1-201ENST00000580252 331 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 MIR3199-1-201ENST00000582434 88 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AC008121.1-201ENST00000603244 268 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AL161798.1-201ENST00000604630 131 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AL158050.2-201ENST00000605336 568 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AC080013.3-201ENST00000606839 578 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AC004908.2-201ENST00000609090 574 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AL356266.1-201ENST00000623311 483 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 AC079416.3-201ENST00000624479 549 ntBASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.13□□□□□ -2.07
ECHDC3Q96DC8 RNU6-1083P-201ENST00000384022 107 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 RN7SKP32-201ENST00000410167 303 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 PIGPP2-201ENST00000411569 458 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AL359704.1-201ENST00000411586 781 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AL591719.1-201ENST00000444669 744 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 MTATP6P7-201ENST00000453315 681 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 RPL7P18-201ENST00000478965 734 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AC026801.1-201ENST00000497178 464 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 RNU6-703P-201ENST00000516946 107 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AP005902.1-201ENST00000521358 186 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 NACAP3-201ENST00000552100 481 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 MTCYBP23-201ENST00000558717 1102 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AC136618.2-201ENST00000575091 400 ntBASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.12□□□□□ -2.07
ECHDC3Q96DC8 AL592221.1-201ENST00000605266 382 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms