Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 ASNSP3-201ENST00000451989 1306 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 HSPA8P1-201ENST00000425843 1833 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 RNY3P14-201ENST00000384309 102 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 MTHFD2P2-201ENST00000407725 247 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 RN7SKP111-201ENST00000410349 271 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 Y_RNA.604-201ENST00000410574 102 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 RNU6-193P-201ENST00000410977 107 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AC080125.1-201ENST00000414888 684 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 RPL7P46-201ENST00000425129 740 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AL158071.1-201ENST00000430315 461 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 MTND3P10-201ENST00000450967 341 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 RPS20P22-201ENST00000473700 357 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AC006445.1-201ENST00000491925 405 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 RPL38P4-201ENST00000502376 214 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AC117522.3-201ENST00000507974 584 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 RNU6-685P-201ENST00000517088 95 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 SUB1P1-201ENST00000524415 382 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AF235103.2-201ENST00000525753 346 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 MIR4276-201ENST00000584832 70 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AC233309.1-201ENST00000619522 751 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AC010338.1-201ENST00000621823 717 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 TPTE2P4-201ENST00000258589 1605 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 OR4G1P-203ENST00000641984 1631 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 AP001148.1-201ENST00000624124 2359 ntBASIC3.8□□□□□ -1.8
TRIM43Q96BQ3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AL672296.1-201ENST00000427780 2158 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 MIR493-201ENST00000385254 89 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 RNU6-550P-201ENST00000391057 101 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 HLFP1-201ENST00000402375 499 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 RPS12P24-201ENST00000412619 387 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AC092809.3-201ENST00000415453 231 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 RPL30P16-201ENST00000419341 429 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AC011742.1-201ENST00000431448 434 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 CBWD4P-201ENST00000445695 655 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 RNU7-170P-201ENST00000459303 61 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AC098591.2-201ENST00000510152 315 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 RNA5SP291-201ENST00000517222 105 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AC004024.1-201ENST00000549244 247 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AC010525.2-201ENST00000590920 195 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AL138889.2-201ENST00000603883 242 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AC006023.1-201ENST00000603944 259 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AC012603.1-201ENST00000606424 528 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AC022893.3-201ENST00000607665 437 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 AC090132.2-201ENST00000615881 347 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 DUXAP9-208ENST00000622815 614 ntBASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM43Q96BQ3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 MIR422A-201ENST00000362286 90 ntBASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 RNU6-116P-201ENST00000384042 109 ntBASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 CISD1P1-201ENST00000393907 327 ntBASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 AC063979.1-201ENST00000415539 377 ntBASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 AC007919.1-201ENST00000429380 217 ntBASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 AF228730.2-201ENST00000438784 848 ntBASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 ELOCP23-201ENST00000452014 332 ntBASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM43Q96BQ3 AC018710.1-201ENST00000506509 158 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms