Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 RNA5SP502-201ENST00000362694 119 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 RNU6-288P-201ENST00000363690 104 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 RNU6-214P-201ENST00000384130 107 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 RNU6-196P-201ENST00000384315 107 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 MIR199A2-201ENST00000385289 110 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 MRPL42P3-201ENST00000401492 326 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 RPL26P6-201ENST00000440913 438 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.55□□□□□ -1.68
BRF1Q92994 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.55□□□□□ -1.68
BRF1Q92994 PRDX3P3-201ENST00000447765 522 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 AL500522.2-201ENST00000448562 343 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 SNORD5.1-201ENST00000458800 75 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 RPL21P41-201ENST00000459863 264 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 RN7SL385P-201ENST00000468873 276 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.55□□□□□ -1.68
BRF1Q92994 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.55□□□□□ -1.68
BRF1Q92994 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.55□□□□□ -1.68
BRF1Q92994 BTF3L4P4-201ENST00000506381 449 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 AC009901.1-201ENST00000506703 541 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.55□□□□□ -1.68
BRF1Q92994 SNORA25.10-201ENST00000515926 124 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 Y_RNA.670-201ENST00000516255 105 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.55□□□□□ -1.68
BRF1Q92994 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC4.55□□□□□ -1.68
BRF1Q92994 AC023442.1-201ENST00000531247 422 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF1Q92994 MIR15A-201ENST00000607334 83 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 AC009229.3-201ENST00000608056 282 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 MIR486-1-201ENST00000612171 68 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 ZYXP1-201ENST00000617638 118 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 AC015967.1-201ENST00000619893 476 ntBASIC4.55□□□□□ -1.68
BRF1Q92994 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.55□□□□□ -1.68
BRF1Q92994 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
BRF1Q92994 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.55□□□□□ -1.68
BRF1Q92994 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.54□□□□□ -1.68
BRF1Q92994 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRF1Q92994 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
BRF1Q92994 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
BRF1Q92994 SNORD62.1-201ENST00000362541 86 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 Y_RNA.404-201ENST00000383978 102 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 RNU1-89P-201ENST00000384592 164 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 RNU6-1106P-201ENST00000390845 107 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 MIR548F4-201ENST00000408515 105 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 Y_RNA.594-201ENST00000410373 140 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 HMGB1P27-201ENST00000431429 603 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 AL645568.3-201ENST00000433683 316 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 AC073063.1-201ENST00000434352 607 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF1Q92994 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF1Q92994 RPL21P11-201ENST00000461458 483 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 AC096745.1-201ENST00000509945 370 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.54□□□□□ -1.68
BRF1Q92994 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF1Q92994 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.54□□□□□ -1.68
BRF1Q92994 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF1Q92994 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.54□□□□□ -1.68
BRF1Q92994 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF1Q92994 AC136624.4-201ENST00000573044 370 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.54□□□□□ -1.68
BRF1Q92994 AC011890.2-201ENST00000613393 294 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.54□□□□□ -1.68
BRF1Q92994 AC092608.2-201ENST00000624427 218 ntBASIC4.54□□□□□ -1.68
BRF1Q92994 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.54□□□□□ -1.68
BRF1Q92994 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.54□□□□□ -1.68
BRF1Q92994 PNPT1P2-201ENST00000456768 2050 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BRF1Q92994 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BRF1Q92994 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
BRF1Q92994 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.53□□□□□ -1.68
BRF1Q92994 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BRF1Q92994 RNA5SP322-201ENST00000363617 119 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 Z99755.1-201ENST00000414048 380 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.53□□□□□ -1.68
BRF1Q92994 BX842559.1-201ENST00000419615 532 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 MTCO1P39-201ENST00000426148 480 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC4.53□□□□□ -1.68
BRF1Q92994 AC236972.1-201ENST00000433225 199 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC4.53□□□□□ -1.68
BRF1Q92994 HSFY6P-201ENST00000445573 403 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BRF1Q92994 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.53□□□□□ -1.68
BRF1Q92994 VN1R104P-201ENST00000505115 1009 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 GMPSP1-201ENST00000514075 579 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 RNA5SP208-201ENST00000516156 78 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 RNA5SP143-201ENST00000516936 115 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
BRF1Q92994 AP003122.3-201ENST00000526316 255 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.53□□□□□ -1.68
BRF1Q92994 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC4.53□□□□□ -1.68
BRF1Q92994 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.53□□□□□ -1.68
BRF1Q92994 AC005951.2-201ENST00000576282 495 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 MIR5692A1-201ENST00000580523 69 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 HMGB1P50-201ENST00000605814 607 ntBASIC4.53□□□□□ -1.68
BRF1Q92994 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.53□□□□□ -1.68
BRF1Q92994 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
BRF1Q92994 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BRF1Q92994 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
BRF1Q92994 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
BRF1Q92994 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.52□□□□□ -1.69
BRF1Q92994 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms