Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AL356266.1-201ENST00000623311 483 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AC019226.1-201ENST00000625666 515 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 AP006437.1-201ENST00000641440 3685 ntBASIC1.93□□□□□ -2.1
CLHC1Q8NHS4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 RNA5SP276-201ENST00000362580 94 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 RNU6-223P-201ENST00000362830 107 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 AL030996.1-201ENST00000411430 235 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 OOSP1P1-201ENST00000423265 274 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 AC013267.1-201ENST00000458227 267 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 AC069528.1-202ENST00000482888 637 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 AC104090.1-201ENST00000506341 1171 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 IGKV3-31-201ENST00000523109 329 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 OR11H5P-201ENST00000554039 926 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 MIR4299-201ENST00000577899 72 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 BBIP1P1-201ENST00000602999 279 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 AC109809.1-201ENST00000619665 545 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 AC064859.1-201ENST00000624741 174 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 AC092447.10-201ENST00000620607 1652 ntBASIC1.92□□□□□ -2.1
CLHC1Q8NHS4 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 RNU6-778P-201ENST00000363269 103 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 SNORA40.2-201ENST00000390847 128 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AL356432.1-201ENST00000405809 419 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 TXNP7-201ENST00000406296 293 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 RN7SKP284-201ENST00000411002 343 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 RNU6-516P-201ENST00000411381 104 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 RPL17P12-201ENST00000413391 526 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 SKA2P1-201ENST00000425592 390 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AC104563.1-201ENST00000476147 376 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 DEFB131D-201ENST00000526803 184 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AL512310.1-201ENST00000548639 172 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AC009063.1-201ENST00000563342 702 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 MTND4LP25-201ENST00000570218 163 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 MIR5089-201ENST00000580047 84 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AC005261.5-201ENST00000596280 355 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AC093673.2-201ENST00000609674 331 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AL512427.1-201ENST00000618593 349 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AC007490.1-201ENST00000624321 703 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 OR1S1-201ENST00000624470 978 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 AL354685.2-201ENST00000448218 1447 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 ADAM3A-203ENST00000461344 2157 ntBASIC1.91□□□□□ -2.1
CLHC1Q8NHS4 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.1
CLHC1Q8NHS4 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 SNORA70B-201ENST00000384210 135 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 RNU6-114P-201ENST00000384704 105 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 RN7SKP192-201ENST00000411291 327 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 RPL26P27-201ENST00000414397 437 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 TIMM9P2-201ENST00000419324 266 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC096920.1-201ENST00000423991 241 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC009238.1-201ENST00000442165 424 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 RPL23AP6-201ENST00000446637 472 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC009237.6-201ENST00000446969 424 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 MTND1P31-201ENST00000449206 961 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 RNA5SP137-201ENST00000516833 135 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 HMGN1P28-201ENST00000521340 364 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC091544.4-201ENST00000555268 342 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AL132657.2-201ENST00000564417 358 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 MIR3167-201ENST00000579623 85 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC243960.4-201ENST00000600532 288 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC004805.2-201ENST00000605382 482 ntBASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.9□□□□□ -2.11
CLHC1Q8NHS4 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms