Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 AK6P1-201ENST00000540219 478 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 AC079598.5-201ENST00000547460 117 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 AC012414.6-201ENST00000568241 401 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 AC005951.2-201ENST00000576282 495 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 MIR4697-201ENST00000582977 78 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 ELOCP5-201ENST00000604924 333 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 AC135507.2-201ENST00000612443 309 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 AC107075.1-201ENST00000613695 314 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 YWHAEP7-203ENST00000622054 312 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 MTND5P9-201ENST00000503854 1755 ntBASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
SPTSSBQ8NFR3 AC006020.1-201ENST00000420179 1854 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AC131280.1-202ENST00000624067 4211 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 MIR302D-201ENST00000362275 68 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 RNU6-439P-201ENST00000384188 106 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AL353621.1-201ENST00000418219 243 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 RPS29P28-201ENST00000446439 141 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 RNU6-775P-201ENST00000459318 96 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 RPL39P28-201ENST00000465655 155 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 RPL9P6-201ENST00000492764 598 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AC093801.2-201ENST00000503966 1050 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AC114781.4-201ENST00000513707 639 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AC017037.2-201ENST00000513850 890 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 RNU6-528P-201ENST00000516926 100 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AP003122.3-201ENST00000526316 255 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 CCNG2P1-201ENST00000549521 1000 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AC008127.2-201ENST00000549925 1075 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 BNIP3P27-201ENST00000599991 412 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AC087241.4-201ENST00000612441 480 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AL603758.1-201ENST00000618654 241 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AL109620.1-201ENST00000618738 1197 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 AL391516.1-201ENST00000554380 2449 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 MTND5P29-201ENST00000458676 1807 ntBASIC0.71□□□□□ -2.3
SPTSSBQ8NFR3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 SNORA5B-201ENST00000363786 132 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 RNU6-271P-201ENST00000363858 105 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 RNU6-1187P-201ENST00000364771 110 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 MIR16-1-201ENST00000385271 89 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 AL590084.1-201ENST00000407885 387 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 RNU2-48P-201ENST00000410694 191 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 RPL37P10-201ENST00000412884 288 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 PTGES3P4-201ENST00000426243 356 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 MTCO2P20-201ENST00000437339 673 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 KRTAP19-11P-201ENST00000439851 104 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 AL691517.1-201ENST00000440833 1235 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 AL050341.1-201ENST00000447743 313 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 RPL39P29-201ENST00000447779 157 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 HMGN1P5-201ENST00000448591 263 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 NDUFA5P7-201ENST00000452914 242 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 snoU13.9-201ENST00000458927 103 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 SNORD97-201ENST00000459187 142 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 AC126389.1-201ENST00000477436 290 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 RAB11AP2-201ENST00000545905 639 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 AC125611.1-201ENST00000549563 229 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 LARP7P2-201ENST00000575306 125 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 MIR3167-201ENST00000579623 85 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 AC011939.3-201ENST00000613686 466 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 AP000560.1-201ENST00000624150 1937 ntBASIC0.7□□□□□ -2.3
SPTSSBQ8NFR3 HAUS6P2-201ENST00000433254 2404 ntBASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SPTSSBQ8NFR3 RBBP8P1-201ENST00000449447 1844 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms