Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNU6-996P-201ENST00000365438 107 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 Y_RNA.573-201ENST00000384763 105 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 Y_RNA.576-201ENST00000384781 102 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AL591416.1-201ENST00000404015 867 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AP000567.1-201ENST00000406413 156 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 USP9YP27-201ENST00000418455 438 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 ELOCP14-201ENST00000428070 331 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC007919.1-201ENST00000429380 217 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AL591212.2-201ENST00000433923 257 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 ELOCP7-201ENST00000439968 331 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 CYCSP32-201ENST00000440548 321 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC016691.1-201ENST00000441321 413 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 MTND1P18-201ENST00000448191 573 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC115115.1-201ENST00000449927 248 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 FGF7P6-202ENST00000451282 293 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 RPS29P15-201ENST00000458329 171 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 RNU6-420P-201ENST00000458780 107 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 GMFBP1-201ENST00000467831 427 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC078785.3-201ENST00000476607 425 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC104806.1-201ENST00000508720 308 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 RNU6-1281P-201ENST00000516223 105 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 SNORA70.19-201ENST00000516717 90 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 RNU6-1282P-201ENST00000516735 96 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 Y_RNA.704-201ENST00000516851 102 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 RANP3-201ENST00000530970 276 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC008752.3-201ENST00000588113 712 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AL162413.1-201ENST00000603198 110 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC022893.3-201ENST00000607665 437 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AL390240.1-201ENST00000612950 384 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC130324.3-201ENST00000614165 542 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AL354950.2-201ENST00000617939 290 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC011155.2-201ENST00000623202 216 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 MIR3688-2-201ENST00000636963 87 ntBASIC3.09□□□□□ -1.91
BEST3Q8N1M1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
BEST3Q8N1M1 AC058791.1-201ENST00000608412 3198 ntBASIC3.09□□□□□ -1.92
BEST3Q8N1M1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
BEST3Q8N1M1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
BEST3Q8N1M1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
BEST3Q8N1M1 AC103710.2-202ENST00000641454 2853 ntBASIC3.09□□□□□ -1.92
BEST3Q8N1M1 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.09□□□□□ -1.92
BEST3Q8N1M1 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
BEST3Q8N1M1 AC006020.1-201ENST00000420179 1854 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 MIR30E-201ENST00000362104 92 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 RNU6-805P-201ENST00000365643 106 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 Y_RNA.381-201ENST00000365666 102 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 RNU6-1029P-201ENST00000384109 107 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 Y_RNA.453-201ENST00000384223 109 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 FAT1P1-201ENST00000406588 507 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 RNU2-29P-201ENST00000410423 189 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC063979.1-201ENST00000415539 377 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 MTCYBP5-201ENST00000423752 1135 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 MTCO1P20-201ENST00000425366 358 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC092573.2-201ENST00000434546 243 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 SNRPEP4-201ENST00000435815 279 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 Z82210.1-201ENST00000440037 231 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 PIGFP3-201ENST00000441918 722 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 Z75741.1-201ENST00000446793 314 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 DPPA3P1-201ENST00000448050 469 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 RPS4XP2-201ENST00000458402 793 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 RNA5SP310-201ENST00000459084 116 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 RPS27P29-201ENST00000463110 252 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 KC877373.1-201ENST00000479066 408 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AL163973.1-201ENST00000484753 577 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 MTAPP1-201ENST00000489154 819 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 PHBP14-201ENST00000512887 367 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AL117351.2-201ENST00000513571 157 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 RNU6-123P-201ENST00000516163 102 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 CASP1P1-201ENST00000526345 212 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC005476.1-201ENST00000554427 397 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC008521.1-201ENST00000587471 187 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.08□□□□□ -1.92
BEST3Q8N1M1 BNIP3P9-201ENST00000603714 553 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AC098826.3-201ENST00000603823 466 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AL161798.1-201ENST00000604630 131 ntBASIC3.08□□□□□ -1.92
BEST3Q8N1M1 AL158032.1-201ENST00000605401 106 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms