Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 RNA5SP208-201ENST00000516156 78 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VRK3Q8IV63 AP005902.1-201ENST00000521358 186 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 AC022695.1-201ENST00000522089 237 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 MIR4286-201ENST00000580651 93 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 VN1R85P-201ENST00000601587 426 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 ATP1B3P1-201ENST00000605365 821 ntBASIC3.77□□□□□ -1.81
VRK3Q8IV63 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VRK3Q8IV63 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VRK3Q8IV63 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
VRK3Q8IV63 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.77□□□□□ -1.81
VRK3Q8IV63 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VRK3Q8IV63 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC027287.1-201ENST00000553115 1453 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
VRK3Q8IV63 RN7SKP280-201ENST00000364196 304 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 RNVU1-3-201ENST00000364313 161 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 RNA5SP97-201ENST00000365006 84 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 MIR30B-201ENST00000384850 88 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 NDUFS5P1-201ENST00000405668 289 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 RNU2-47P-201ENST00000410649 186 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 RPS15AP40-201ENST00000419621 391 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 RPL30P3-201ENST00000424262 333 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 AL590632.1-201ENST00000424289 371 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC117503.1-201ENST00000472241 394 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC069499.1-201ENST00000489433 509 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 AP001086.1-201ENST00000494882 321 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 RAC1P2-201ENST00000511164 579 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 RNU1-54P-201ENST00000517181 120 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 Y_RNA.721-201ENST00000517207 102 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 HMGN1P28-201ENST00000521340 364 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VRK3Q8IV63 TOMM20P2-201ENST00000540082 421 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC106782.4-201ENST00000568264 210 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC005255.1-201ENST00000593748 216 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 AL138889.2-201ENST00000603883 242 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC110741.2-201ENST00000605278 268 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 TUG1_2.1-201ENST00000614234 87 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC004696.1-201ENST00000614345 607 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 AL354798.1-201ENST00000622505 329 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC005592.1-201ENST00000566527 1640 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC018555.1-201ENST00000567548 1980 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.76□□□□□ -1.81
VRK3Q8IV63 MTCO1P24-201ENST00000515438 1558 ntBASIC3.76□□□□□ -1.81
VRK3Q8IV63 AC008725.1-201ENST00000605123 2263 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VRK3Q8IV63 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
VRK3Q8IV63 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
VRK3Q8IV63 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.75□□□□□ -1.81
VRK3Q8IV63 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VRK3Q8IV63 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
VRK3Q8IV63 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VRK3Q8IV63 AL133412.1-201ENST00000380194 2992 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 RNU6-339P-201ENST00000384310 107 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 RNU6-434P-201ENST00000384376 107 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 RNU6-95P-201ENST00000384697 107 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 RPL21P24-201ENST00000413752 448 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 Z99755.1-201ENST00000414048 380 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.75□□□□□ -1.81
VRK3Q8IV63 AC243428.1-201ENST00000421099 264 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.75□□□□□ -1.81
VRK3Q8IV63 AC236972.1-201ENST00000433225 199 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 SNORA71B-202ENST00000439232 272 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 AC007967.1-201ENST00000455422 1159 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 AC084198.1-201ENST00000477747 402 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 AC092451.1-201ENST00000480211 153 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 AC026801.1-201ENST00000497178 464 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.75□□□□□ -1.81
VRK3Q8IV63 CYCSP27-201ENST00000527643 293 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.75□□□□□ -1.81
VRK3Q8IV63 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.75□□□□□ -1.81
VRK3Q8IV63 RPL23AP84-201ENST00000571193 464 ntBASIC3.75□□□□□ -1.81
VRK3Q8IV63 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms