Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AC013267.1-201ENST00000458227 267 ntBASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 RPL9P32-201ENST00000464118 620 ntBASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 AC008413.1-201ENST00000511864 177 ntBASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 SNORA31.22-201ENST00000517204 135 ntBASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 AP004242.1-201ENST00000533701 349 ntBASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 AL512360.1-201ENST00000555346 234 ntBASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 AC234778.2-201ENST00000566241 354 ntBASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 AL355810.1-201ENST00000614629 552 ntBASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 AC073476.4-201ENST00000628409 72 ntBASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.93□□□□□ -1.78
KRT28Q7Z3Y7 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 AC073343.1-201ENST00000328239 651 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 RNU1-39P-201ENST00000383897 165 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 MIR558-201ENST00000384920 94 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 SNORD115-47-201ENST00000391226 86 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 RNU2-9P-201ENST00000410194 145 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 BMS1P22-201ENST00000414726 313 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 OR2AS1P-201ENST00000427827 319 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 AL139415.2-201ENST00000431968 163 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 BNIP3P2-201ENST00000441221 577 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 MTND2P24-201ENST00000453434 806 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 RPL23AP62-201ENST00000463396 453 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 ARL2BPP6-201ENST00000512757 439 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 RNU2-58P-201ENST00000516403 183 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 RNU6-1231P-201ENST00000517185 103 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 AP003034.1-201ENST00000534621 422 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 MIR4769-201ENST00000584126 77 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 AC004832.5-201ENST00000608677 401 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 SDR42E1P2-201ENST00000614861 481 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 AC010133.1-201ENST00000615809 842 ntBASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KRT28Q7Z3Y7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 RNU6-1120P-201ENST00000362988 108 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 Y_RNA.159-201ENST00000363674 87 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 RNA5SP68-201ENST00000363885 119 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 RNU5E-6P-201ENST00000365574 115 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 Y_RNA.481-201ENST00000384373 102 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 MIR1-2-201ENST00000384961 85 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 RNU6-55P-201ENST00000411092 107 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 RNU6-954P-201ENST00000411355 107 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 ELOCP14-201ENST00000428070 331 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 MED13P1-201ENST00000428342 171 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 VDAC1P3-201ENST00000434069 851 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 HMGB3P12-201ENST00000438745 556 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AL138799.3-201ENST00000438968 350 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 ELOCP7-201ENST00000439968 331 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AC027673.1-201ENST00000456245 405 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AC019235.1-201ENST00000503847 207 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 HMGB1P33-201ENST00000563485 527 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AC025449.1-201ENST00000603896 529 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AP002360.4-201ENST00000606980 481 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AC017083.3-201ENST00000609955 700 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 MIR7843-201ENST00000622274 79 ntBASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
KRT28Q7Z3Y7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
KRT28Q7Z3Y7 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
KRT28Q7Z3Y7 DEFB108F-201ENST00000344638 222 ntBASIC3.9□□□□□ -1.79
KRT28Q7Z3Y7 SNORA31-201ENST00000362607 130 ntBASIC3.9□□□□□ -1.79
KRT28Q7Z3Y7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
KRT28Q7Z3Y7 SNORA67.4-201ENST00000384688 142 ntBASIC3.9□□□□□ -1.79
KRT28Q7Z3Y7 MIR9-1-201ENST00000385198 89 ntBASIC3.9□□□□□ -1.79
KRT28Q7Z3Y7 RNU6-780P-201ENST00000391030 104 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms