Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.47□□□□□ -1.53
RNF20Q5VTR2 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF20Q5VTR2 RNA5SP446-201ENST00000515955 82 ntBASIC5.47□□□□□ -1.53
RNF20Q5VTR2 SNORD116-26-201ENST00000516006 96 ntBASIC5.47□□□□□ -1.53
RNF20Q5VTR2 RNU6-927P-201ENST00000516199 100 ntBASIC5.47□□□□□ -1.53
RNF20Q5VTR2 RNU6-1338P-201ENST00000516328 91 ntBASIC5.47□□□□□ -1.53
RNF20Q5VTR2 SCARNA24.2-201ENST00000516968 130 ntBASIC5.47□□□□□ -1.53
RNF20Q5VTR2 AC093023.1-201ENST00000547375 507 ntBASIC5.47□□□□□ -1.53
RNF20Q5VTR2 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.47□□□□□ -1.53
RNF20Q5VTR2 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC5.47□□□□□ -1.53
RNF20Q5VTR2 AC136932.1-201ENST00000574771 208 ntBASIC5.47□□□□□ -1.53
RNF20Q5VTR2 MIR4300-201ENST00000581016 96 ntBASIC5.47□□□□□ -1.53
RNF20Q5VTR2 MIR4436B2-201ENST00000581415 91 ntBASIC5.47□□□□□ -1.53
RNF20Q5VTR2 MIR4436B1-201ENST00000583272 91 ntBASIC5.47□□□□□ -1.53
RNF20Q5VTR2 RPL7P50-201ENST00000600588 727 ntBASIC5.47□□□□□ -1.53
RNF20Q5VTR2 MIR8076-201ENST00000611401 83 ntBASIC5.47□□□□□ -1.53
RNF20Q5VTR2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF20Q5VTR2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
RNF20Q5VTR2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
RNF20Q5VTR2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
RNF20Q5VTR2 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC5.46□□□□□ -1.53
RNF20Q5VTR2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
RNF20Q5VTR2 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
RNF20Q5VTR2 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.143-201ENST00000363520 106 ntBASIC5.46□□□□□ -1.54
RNF20Q5VTR2 RN7SKP227-201ENST00000364445 330 ntBASIC5.46□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.358-201ENST00000365491 99 ntBASIC5.46□□□□□ -1.54
RNF20Q5VTR2 RNU6-662P-201ENST00000384253 104 ntBASIC5.46□□□□□ -1.54
RNF20Q5VTR2 MIR301A-201ENST00000385261 86 ntBASIC5.46□□□□□ -1.54
RNF20Q5VTR2 MIR1298-201ENST00000408783 112 ntBASIC5.46□□□□□ -1.54
RNF20Q5VTR2 SNORD56-201ENST00000413522 71 ntBASIC5.46□□□□□ -1.54
RNF20Q5VTR2 MTND3P9-201ENST00000429526 346 ntBASIC5.46□□□□□ -1.54
RNF20Q5VTR2 RNU7-87P-201ENST00000459343 62 ntBASIC5.46□□□□□ -1.54
RNF20Q5VTR2 AC093270.2-201ENST00000486157 792 ntBASIC5.46□□□□□ -1.54
RNF20Q5VTR2 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF20Q5VTR2 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF20Q5VTR2 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF20Q5VTR2 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF20Q5VTR2 RNU6-255P-201ENST00000516957 105 ntBASIC5.46□□□□□ -1.54
RNF20Q5VTR2 AC103996.1-201ENST00000555468 102 ntBASIC5.46□□□□□ -1.54
RNF20Q5VTR2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.46□□□□□ -1.54
RNF20Q5VTR2 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF20Q5VTR2 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF20Q5VTR2 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
RNF20Q5VTR2 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF20Q5VTR2 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
RNF20Q5VTR2 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.46□□□□□ -1.54
RNF20Q5VTR2 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 Y_RNA.33-201ENST00000362591 102 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 RNU6-545P-201ENST00000362681 104 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 SNORD50.1-201ENST00000362987 71 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 RNU6-384P-201ENST00000364900 104 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 MIR195-201ENST00000385194 87 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 AL606753.1-201ENST00000427435 87 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 RPL23AP22-201ENST00000437556 453 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 RN7SL817P-201ENST00000480777 288 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 AC083982.1-201ENST00000485679 344 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 RPL30P10-201ENST00000488148 337 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 RNA5SP360-201ENST00000516555 118 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 HIGD1AP5-201ENST00000529959 259 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 AL590705.4-201ENST00000532209 134 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 SYF2P1-201ENST00000550658 413 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 AL161713.1-201ENST00000555538 145 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 AC091905.2-201ENST00000623143 306 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 U6.92-201ENST00000636464 89 ntBASIC5.45□□□□□ -1.54
RNF20Q5VTR2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.45□□□□□ -1.54
RNF20Q5VTR2 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AL450326.2-201ENST00000421913 1962 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AC027290.2-201ENST00000623210 18662 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 RN7SKP224-201ENST00000364140 325 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 U3.13-201ENST00000364804 214 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 RNU6-395P-201ENST00000365662 106 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 RNU2-20P-201ENST00000410425 191 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 RNU6-1025P-201ENST00000410629 104 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AC119751.6-201ENST00000416712 186 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 MTATP6P4-201ENST00000427725 675 ntBASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.44□□□□□ -1.54
RNF20Q5VTR2 RPL29P29-201ENST00000448725 423 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms