Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.33□□□□□ -1.88
RUNDC3AQ59EK9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.33□□□□□ -1.88
RUNDC3AQ59EK9 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RUNDC3AQ59EK9 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 MFSD8-233ENST00000641482 4860 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AL136164.4-201ENST00000625013 2135 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 RNU1-75P-201ENST00000347264 129 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 RNA5SP295-201ENST00000362655 121 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 SNORA48.8-201ENST00000391324 134 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 RNU6-193P-201ENST00000410977 107 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 OR9R1P-201ENST00000412200 877 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 SNRPEP10-201ENST00000420249 274 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 RPL36AP53-201ENST00000432891 316 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 SNRPEP4-201ENST00000435815 279 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 SNRPEP9-201ENST00000436794 238 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 RPL12P25-201ENST00000455592 494 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 SNRPFP3-201ENST00000457792 225 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 RPS27P29-201ENST00000463110 252 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 RPL30P14-201ENST00000482744 348 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 RNA5SP165-201ENST00000517142 115 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AL133241.1-201ENST00000556832 487 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AC002553.4-201ENST00000616896 331 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AP003355.3-201ENST00000623465 114 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 MTND5P27-201ENST00000428871 1720 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AL359693.1-201ENST00000614959 2407 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 AC007496.3-201ENST00000624987 3443 ntBASIC3.32□□□□□ -1.88
RUNDC3AQ59EK9 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC022336.2-201ENST00000568966 2538 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AL513302.2-201ENST00000562313 1842 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 RNU6-877P-201ENST00000383868 107 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 RNU6-1035P-201ENST00000384477 107 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 SNORA57.1-201ENST00000391227 145 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 RNA5SP38-201ENST00000410750 119 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 USP9YP6-201ENST00000413550 854 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC063979.1-201ENST00000415539 377 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 HMGB3P11-201ENST00000440127 604 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 RN7SL442P-201ENST00000473804 320 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 RPL32P34-201ENST00000486380 400 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 CCDC34P1-201ENST00000507441 517 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC010265.1-201ENST00000513509 211 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 RNU4-29P-201ENST00000515943 174 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 RNU6-143P-201ENST00000516942 93 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC007991.1-201ENST00000522680 631 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AL137161.1-201ENST00000532231 390 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 HMGB1P14-201ENST00000557424 591 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC037471.2-201ENST00000564941 598 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC106785.1-201ENST00000565935 262 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 MIR3609-201ENST00000582661 80 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AL109618.2-201ENST00000605527 211 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 FTX_3.1-201ENST00000610451 147 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 DISC2.1-201ENST00000612827 205 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 AC024614.3-201ENST00000637860 256 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
RUNDC3AQ59EK9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 NACAP2-201ENST00000318548 624 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 FRG1CP-201ENST00000358464 769 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 RN7SKP280-201ENST00000364196 304 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 SNORA75B-201ENST00000384053 137 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 RNU6-1127P-201ENST00000384580 107 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 MIR514A2-201ENST00000385131 88 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 MIR514A3-201ENST00000385132 88 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 SNORD37.1-201ENST00000390968 65 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 AL356967.1-201ENST00000406305 431 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 AL606923.1-201ENST00000406616 190 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 AC093578.1-201ENST00000415219 368 ntBASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.3□□□□□ -1.88
RUNDC3AQ59EK9 ATP5JP1-201ENST00000431631 322 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms