Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RNU6-552P-201ENST00000362869 119 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 Y_RNA.67-201ENST00000362870 100 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 MIR490-201ENST00000384865 128 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AL139397.2-201ENST00000404529 772 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RNU6-1148P-201ENST00000410992 104 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RNU6-373P-201ENST00000411247 98 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 BX323014.1-201ENST00000412876 237 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AC087650.1-201ENST00000431445 468 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 ATP5JP1-201ENST00000431631 322 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 ATP5HP2-201ENST00000433885 485 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 MTND1P18-201ENST00000448191 573 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RPL31P60-201ENST00000478450 367 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 EIF4EP3-201ENST00000498782 656 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AC103851.1-201ENST00000506833 274 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AC104806.1-201ENST00000508720 308 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AC023141.12-201ENST00000512399 199 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RN7SKP13-201ENST00000515933 244 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RNU6-1256P-201ENST00000516539 103 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RN7SKP60-201ENST00000516985 239 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RN7SKP57-201ENST00000517248 293 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 GNRHR2P1-201ENST00000555315 631 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AL355375.2-201ENST00000574825 175 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 MIR4703-201ENST00000577728 79 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 MTCO3P13-201ENST00000577757 781 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AC022432.1-201ENST00000595739 310 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AL158032.1-201ENST00000605401 106 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RMST_7.1-201ENST00000621935 268 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AC090617.10-201ENST00000624308 134 ntBASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.87□□□□□ -1.79
SLC44A4Q53GD3 AC004972.1-201ENST00000623934 2209 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 SNORA63-201ENST00000363450 132 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 Y_RNA.166-201ENST00000363730 102 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 SNORD37.1-201ENST00000390968 65 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 RNU6-903P-201ENST00000391270 109 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 HMGN2P8-201ENST00000391458 268 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AL136116.1-201ENST00000403591 381 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 MIR1302-11-201ENST00000408051 138 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 MIR1302-9-201ENST00000408365 138 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 MIR1302-10-201ENST00000408734 138 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC011742.1-201ENST00000431448 434 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AL365400.1-201ENST00000431854 640 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 RPL36AP6-201ENST00000435770 321 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC233279.1-201ENST00000455300 423 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 CEACAMP4-201ENST00000457676 421 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 RPS29P2-201ENST00000479278 136 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC105417.1-201ENST00000514691 285 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 Y_RNA.689-201ENST00000516589 107 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 BTF3P12-201ENST00000519620 469 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC007458.1-201ENST00000542812 373 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC011611.1-201ENST00000552179 197 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 MIR5583-1-201ENST00000580941 59 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 MIR1302-2-201ENST00000607096 138 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC012531.5-201ENST00000611375 151 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC012409.4-201ENST00000612923 249 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC009248.2-201ENST00000619826 254 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AL160413.1-201ENST00000622780 310 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AC007998.5-201ENST00000622938 237 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 ASNSP3-201ENST00000451989 1306 ntBASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SLC44A4Q53GD3 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms