Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CCDC58Q4VC31 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
CCDC58Q4VC31 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
CCDC58Q4VC31 SNORA62.1-201ENST00000364287 154 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 Z86062.1-201ENST00000406773 777 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AL139098.1-201ENST00000407291 389 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC58Q4VC31 CYP2C59P-201ENST00000457790 269 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 RNU1-123P-201ENST00000458950 160 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 OR2A41P-201ENST00000473586 105 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AC132942.1-201ENST00000486753 483 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AC119751.5-201ENST00000514077 770 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC58Q4VC31 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CCDC58Q4VC31 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.13□□□□□ -2.23
CCDC58Q4VC31 MIR4422-201ENST00000581938 83 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AC242628.1-201ENST00000606810 391 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.13□□□□□ -2.23
CCDC58Q4VC31 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
CCDC58Q4VC31 VN1R9P-201ENST00000614184 867 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AC108479.2-201ENST00000617314 601 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AL118508.4-201ENST00000624142 1176 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 AC007490.1-201ENST00000624321 703 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 SEC63P2-201ENST00000503863 1939 ntBASIC1.13□□□□□ -2.23
CCDC58Q4VC31 Y_RNA.111-201ENST00000363248 100 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 SNORA25B-201ENST00000365507 128 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
CCDC58Q4VC31 RNU6-174P-201ENST00000410406 106 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 AL160275.3-201ENST00000423876 471 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 USP9YP35-201ENST00000435696 412 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 HMGB1P31-201ENST00000437242 427 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 AL354941.1-201ENST00000438600 464 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 CR769776.1-201ENST00000441254 787 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 MTND2P24-201ENST00000453434 806 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC58Q4VC31 AP003033.1-201ENST00000527244 415 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 AC019288.1-201ENST00000557918 224 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 AC103987.3-201ENST00000582071 292 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 AL645939.4-201ENST00000604495 135 ntBASIC1.12□□□□□ -2.23
CCDC58Q4VC31 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.12□□□□□ -2.23
CCDC58Q4VC31 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.12□□□□□ -2.23
CCDC58Q4VC31 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.11□□□□□ -2.23
CCDC58Q4VC31 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CCDC58Q4VC31 SNORA25.8-201ENST00000364831 128 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 MIR618-201ENST00000385287 98 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 RPL23AP29-201ENST00000397284 453 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 MIR1283-2-201ENST00000408621 87 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC58Q4VC31 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.11□□□□□ -2.23
CCDC58Q4VC31 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.11□□□□□ -2.23
CCDC58Q4VC31 RNA5SP291-201ENST00000517222 105 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 RPL21P5-201ENST00000554662 472 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 MIR4513-201ENST00000581077 86 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
CCDC58Q4VC31 AP005901.5-201ENST00000545779 1796 ntBASIC1.11□□□□□ -2.23
CCDC58Q4VC31 RNA5SP465-201ENST00000391195 109 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AL109755.1-201ENST00000401791 649 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AL121978.1-201ENST00000402778 359 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC58Q4VC31 UBE2V1P4-201ENST00000425374 344 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 ZYG11AP1-201ENST00000430329 837 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 MTND5P25-201ENST00000430499 799 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC58Q4VC31 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AC116337.1-201ENST00000509680 687 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AC008837.1-201ENST00000511513 412 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC58Q4VC31 SNORD19.2-201ENST00000516978 73 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.1□□□□□ -2.23
CCDC58Q4VC31 VN1R88P-201ENST00000596787 292 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AL445493.3-201ENST00000619568 477 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 AC083865.1-201ENST00000636634 831 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC58Q4VC31 ZNF209P-201ENST00000593450 2304 ntBASIC1.1□□□□□ -2.23
CCDC58Q4VC31 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
CCDC58Q4VC31 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.09□□□□□ -2.23
CCDC58Q4VC31 SNORA22-201ENST00000383907 134 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 SNORA22C-201ENST00000384614 134 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 SNORA40.6-201ENST00000391153 128 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 CYCSP49-201ENST00000420810 319 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.09□□□□□ -2.23
CCDC58Q4VC31 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.09□□□□□ -2.23
CCDC58Q4VC31 RPS29P29-201ENST00000456396 171 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 SNORD13-201ENST00000459299 104 ntBASIC1.09□□□□□ -2.23
CCDC58Q4VC31 RPS27AP10-201ENST00000496103 208 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms