Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 Y_RNA.295-201ENST00000364918 102 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.53□□□□□ -2.32
TFF3Q07654 AC012497.1-201ENST00000429392 575 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 HMGB1P9-201ENST00000429856 646 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AC098934.3-201ENST00000430450 190 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.53□□□□□ -2.32
TFF3Q07654 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC0.53□□□□□ -2.32
TFF3Q07654 PRPS1P1-201ENST00000445305 876 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.53□□□□□ -2.32
TFF3Q07654 AC099513.1-201ENST00000490423 301 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.53□□□□□ -2.32
TFF3Q07654 RNA5SP330-201ENST00000517096 96 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC0.53□□□□□ -2.32
TFF3Q07654 AC104229.1-201ENST00000561364 255 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AC092474.3-201ENST00000603022 568 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AC034236.3-201ENST00000605999 461 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AL355802.3-201ENST00000607571 545 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 DUXAP10-204ENST00000612052 616 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AC079395.3-201ENST00000615161 484 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AC025588.4-201ENST00000615802 908 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AC018755.4-201ENST00000619715 454 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 AC091925.2-201ENST00000625059 256 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 MIR924-201ENST00000638017 53 ntBASIC0.53□□□□□ -2.32
TFF3Q07654 HSBP1P2-201ENST00000299671 229 ntBASIC0.52□□□□□ -2.33
TFF3Q07654 Y_RNA.115-201ENST00000363272 98 ntBASIC0.52□□□□□ -2.33
TFF3Q07654 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC0.52□□□□□ -2.33
TFF3Q07654 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.52□□□□□ -2.33
TFF3Q07654 AC092634.2-201ENST00000428146 1010 ntBASIC0.52□□□□□ -2.33
TFF3Q07654 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.52□□□□□ -2.33
TFF3Q07654 PTENP1-201ENST00000447117 1215 ntBASIC0.52□□□□□ -2.33
TFF3Q07654 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC0.52□□□□□ -2.33
TFF3Q07654 AC109927.2-201ENST00000506416 303 ntBASIC0.52□□□□□ -2.33
TFF3Q07654 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.52□□□□□ -2.33
TFF3Q07654 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC0.52□□□□□ -2.33
TFF3Q07654 HSPE1P7-201ENST00000604681 321 ntBASIC0.52□□□□□ -2.33
TFF3Q07654 AC243829.3-201ENST00000622177 108 ntBASIC0.52□□□□□ -2.33
TFF3Q07654 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
TFF3Q07654 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.51□□□□□ -2.33
TFF3Q07654 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.51□□□□□ -2.33
TFF3Q07654 MTCYBP34-201ENST00000439552 670 ntBASIC0.51□□□□□ -2.33
TFF3Q07654 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC0.51□□□□□ -2.33
TFF3Q07654 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC0.51□□□□□ -2.33
TFF3Q07654 SNRPGP6-201ENST00000451124 220 ntBASIC0.51□□□□□ -2.33
TFF3Q07654 AC107626.1-201ENST00000471084 183 ntBASIC0.51□□□□□ -2.33
TFF3Q07654 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC0.51□□□□□ -2.33
TFF3Q07654 CBX3P3-201ENST00000508108 532 ntBASIC0.51□□□□□ -2.33
TFF3Q07654 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.51□□□□□ -2.33
TFF3Q07654 AC004817.2-201ENST00000561794 651 ntBASIC0.51□□□□□ -2.33
TFF3Q07654 AC022254.1-201ENST00000567857 235 ntBASIC0.51□□□□□ -2.33
TFF3Q07654 NIFKP6-201ENST00000598115 845 ntBASIC0.51□□□□□ -2.33
TFF3Q07654 AC009229.3-201ENST00000608056 282 ntBASIC0.51□□□□□ -2.33
TFF3Q07654 AC096772.1-201ENST00000609146 564 ntBASIC0.51□□□□□ -2.33
TFF3Q07654 AC095038.3-201ENST00000634439 195 ntBASIC0.51□□□□□ -2.33
TFF3Q07654 MTND4P31-201ENST00000425607 1343 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 MIR330-201ENST00000362196 94 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 RPL37P10-201ENST00000412884 288 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.5□□□□□ -2.33
TFF3Q07654 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TFF3Q07654 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.5□□□□□ -2.33
TFF3Q07654 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.5□□□□□ -2.33
TFF3Q07654 AL096803.2-201ENST00000450032 677 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.5□□□□□ -2.33
TFF3Q07654 RPL9P9-202ENST00000466501 579 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC0.5□□□□□ -2.33
TFF3Q07654 RNU6-362P-201ENST00000516736 90 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 AP003484.1-201ENST00000530974 250 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.5□□□□□ -2.33
TFF3Q07654 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC0.5□□□□□ -2.33
TFF3Q07654 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.5□□□□□ -2.33
TFF3Q07654 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC0.5□□□□□ -2.33
TFF3Q07654 MIR4713-201ENST00000582691 75 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 AL031775.1-201ENST00000607014 887 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 AL355816.1-201ENST00000607951 118 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 AC090132.2-201ENST00000615881 347 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 AC091925.1-201ENST00000623204 462 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 AL391516.1-201ENST00000554380 2449 ntBASIC0.5□□□□□ -2.33
TFF3Q07654 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
TFF3Q07654 AC096656.1-201ENST00000623826 1364 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 RNU1-105P-201ENST00000363470 161 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 SNORA8-201ENST00000384574 139 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 RNU6-1222P-201ENST00000384615 107 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
TFF3Q07654 TATDN1P1-201ENST00000414123 891 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 AL358176.2-201ENST00000425769 204 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 AL591043.1-201ENST00000432461 424 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 TRBV25OR9-2-201ENST00000438417 374 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC0.49□□□□□ -2.33
TFF3Q07654 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.49□□□□□ -2.33
TFF3Q07654 RNU6-775P-201ENST00000459318 96 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
TFF3Q07654 MIR4653-201ENST00000585107 83 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 AL031274.2-201ENST00000599419 203 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 GAS5-AS1-201ENST00000602767 694 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 MIR8087-201ENST00000612745 78 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 AC139769.3-201ENST00000618383 175 ntBASIC0.49□□□□□ -2.33
TFF3Q07654 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.49□□□□□ -2.33
TFF3Q07654 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
TFF3Q07654 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
TFF3Q07654 RNU6-670P-201ENST00000364312 104 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms