Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ZNF720P1-201ENST00000562403 1939 ntBASIC2.19□□□□□ -2.06
HMGCS1Q01581 U8.14-201ENST00000390843 143 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 AL591416.1-201ENST00000404015 867 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 AL513331.1-201ENST00000411908 397 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 Z82210.1-201ENST00000440037 231 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 MTND5P2-201ENST00000442927 1142 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 GDI2P2-201ENST00000445131 608 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 MRPL42P6-201ENST00000486397 371 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 AC090096.1-201ENST00000489168 390 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HMGCS1Q01581 RNA5SP24-201ENST00000516478 95 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 RNA5SP82-201ENST00000516707 92 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 RNU6-64P-201ENST00000517119 105 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 AP003122.3-201ENST00000526316 255 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 AP000889.1-201ENST00000530968 660 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 AP001004.1-201ENST00000582468 324 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 AC002545.1-201ENST00000592511 181 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 DPPA3P3-201ENST00000603842 430 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 AC004908.2-201ENST00000609090 574 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 AC009159.2-201ENST00000617603 606 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 AL356266.1-201ENST00000623311 483 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.18□□□□□ -2.06
HMGCS1Q01581 AC008993.2-201ENST00000631744 806 ntBASIC2.18□□□□□ -2.06
HMGCS1Q01581 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGCS1Q01581 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGCS1Q01581 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
HMGCS1Q01581 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HMGCS1Q01581 MIRLET7G-201ENST00000362280 84 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 Y_RNA.46-201ENST00000362695 102 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 XGY1-201ENST00000381172 446 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 RNU6-741P-201ENST00000383889 107 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 MIR144-201ENST00000384886 86 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 AL139397.2-201ENST00000404529 772 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 RNU2-33P-201ENST00000410344 192 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC005094.1-201ENST00000440420 368 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 AL049734.2-201ENST00000441066 616 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC011753.1-201ENST00000451001 220 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC233279.1-201ENST00000455300 423 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 RNU7-59P-201ENST00000459101 61 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC073901.1-201ENST00000462471 408 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 RPS20P22-201ENST00000473700 357 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC068587.2-201ENST00000478386 781 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 HMGB3P3-201ENST00000510526 400 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC116347.2-201ENST00000514912 523 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 MTCYBP20-201ENST00000524239 1129 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 SUB1P1-201ENST00000524415 382 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC007115.1-201ENST00000546853 234 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 MIR4513-201ENST00000581077 86 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 MIR4293-201ENST00000584305 78 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 MIR4658-201ENST00000584344 65 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 AP000403.1-201ENST00000603349 851 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC009159.1-201ENST00000618386 642 ntBASIC2.17□□□□□ -2.06
HMGCS1Q01581 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.17□□□□□ -2.06
HMGCS1Q01581 AC022336.2-201ENST00000568966 2538 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 AL139276.1-201ENST00000311910 1001 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 RNA5SP289-201ENST00000362332 137 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 RNU6-217P-201ENST00000384164 104 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 RNU6-140P-201ENST00000384566 108 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 RPS20P2-201ENST00000402520 389 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 RPL23AP39-201ENST00000415533 405 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 USP9YP26-201ENST00000421008 661 ntBASIC2.16□□□□□ -2.06
HMGCS1Q01581 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms