Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXC5Q00444 AC003685.2-201ENST00000422795 395 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 BX276092.3-201ENST00000424182 230 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 AC098831.1-201ENST00000440661 216 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 MTND2P20-201ENST00000440805 661 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.56□□□□□ -2.16
HOXC5Q00444 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.56□□□□□ -2.16
HOXC5Q00444 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXC5Q00444 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXC5Q00444 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXC5Q00444 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.56□□□□□ -2.16
HOXC5Q00444 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
HOXC5Q00444 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXC5Q00444 RNU6-583P-201ENST00000516012 92 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 SNORA31.25-201ENST00000517242 134 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXC5Q00444 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.56□□□□□ -2.16
HOXC5Q00444 AP003497.1-201ENST00000528472 562 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 OR6C7P-201ENST00000547875 934 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.56□□□□□ -2.16
HOXC5Q00444 DEFB122-202ENST00000569013 197 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HOXC5Q00444 AC007229.1-201ENST00000590455 412 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 AC069304.2-201ENST00000605154 435 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 AC104763.3-201ENST00000613765 618 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 AL445264.1-201ENST00000621719 171 ntBASIC1.56□□□□□ -2.16
HOXC5Q00444 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.56□□□□□ -2.16
HOXC5Q00444 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
HOXC5Q00444 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
HOXC5Q00444 ADAM3A-203ENST00000461344 2157 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 AP005901.5-201ENST00000545779 1796 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 AL356292.1-201ENST00000283110 373 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 RNU6-778P-201ENST00000363269 103 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
HOXC5Q00444 Y_RNA.408-201ENST00000383987 102 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 NDUFS5P4-201ENST00000412983 318 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 SNORD56-201ENST00000413522 71 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.55□□□□□ -2.16
HOXC5Q00444 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.55□□□□□ -2.16
HOXC5Q00444 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.55□□□□□ -2.16
HOXC5Q00444 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.55□□□□□ -2.16
HOXC5Q00444 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
HOXC5Q00444 ZYG11AP1-201ENST00000430329 837 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.55□□□□□ -2.16
HOXC5Q00444 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
HOXC5Q00444 RPL7P54-201ENST00000438336 674 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.55□□□□□ -2.16
HOXC5Q00444 RPL32P28-201ENST00000443577 397 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.55□□□□□ -2.16
HOXC5Q00444 AC008837.1-201ENST00000511513 412 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 MRPS17P9-201ENST00000511924 393 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 SNORA25.11-201ENST00000515935 105 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 RNA5SP182-201ENST00000516064 82 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.55□□□□□ -2.16
HOXC5Q00444 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.55□□□□□ -2.16
HOXC5Q00444 AC104417.1-201ENST00000523974 751 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.55□□□□□ -2.16
HOXC5Q00444 MIR3167-201ENST00000579623 85 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 AC022662.1-201ENST00000580252 331 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 AF038458.1-201ENST00000588406 262 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 AC013412.1-201ENST00000610687 192 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 U2.21-201ENST00000637295 81 ntBASIC1.55□□□□□ -2.16
HOXC5Q00444 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
HOXC5Q00444 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HOXC5Q00444 Y_RNA.245-201ENST00000364493 95 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AC068533.2-201ENST00000411872 306 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.54□□□□□ -2.16
HOXC5Q00444 UBE2FP1-201ENST00000416536 447 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 MTND1P28-201ENST00000435623 950 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.54□□□□□ -2.16
HOXC5Q00444 COX7BP2-201ENST00000437976 242 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 BTBD7P2-201ENST00000441962 620 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AC080013.2-201ENST00000460866 323 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AP001324.2-201ENST00000461163 319 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AC021382.1-201ENST00000483523 359 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AC079203.1-201ENST00000487972 404 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AC104564.1-201ENST00000493028 407 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 RNY4P37-201ENST00000516225 96 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 RNU6-1225P-201ENST00000516336 65 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 CYCSP2-201ENST00000558168 301 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.54□□□□□ -2.16
HOXC5Q00444 MIR4287-201ENST00000579398 78 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AC239868.4-201ENST00000608318 671 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 MIR6845-201ENST00000613182 61 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AC008759.3-201ENST00000613300 508 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 TUG1_2.1-201ENST00000614234 87 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AL357080.1-201ENST00000617394 239 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AC093875.1-201ENST00000623688 504 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AC099063.3-201ENST00000642066 185 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 AC092881.1-201ENST00000638218 2733 ntBASIC1.54□□□□□ -2.16
HOXC5Q00444 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HOXC5Q00444 AP006437.1-201ENST00000641440 3685 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
HOXC5Q00444 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.53□□□□□ -2.16
HOXC5Q00444 RNA5SP276-201ENST00000362580 94 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 RNU5B-4P-201ENST00000363508 111 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
HOXC5Q00444 U8.13-201ENST00000390842 128 ntBASIC1.53□□□□□ -2.16
HOXC5Q00444 CCNG1P1-201ENST00000406783 885 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms