Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 HMGB1P35-201ENST00000503360 598 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AC008837.1-201ENST00000511513 412 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AC091965.2-201ENST00000512324 613 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.49□□□□□ -2.17
H3F3AP84243 AC093677.1-201ENST00000514414 678 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 SNORA4.4-201ENST00000515921 135 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC1.49□□□□□ -2.17
H3F3AP84243 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.49□□□□□ -2.17
H3F3AP84243 AC012435.1-202ENST00000568772 240 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AC090615.1-201ENST00000577519 154 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AC010928.2-201ENST00000588017 287 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AL357094.1-201ENST00000603845 844 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.49□□□□□ -2.17
H3F3AP84243 MIR8081-201ENST00000611533 95 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AL138478.1-201ENST00000612252 832 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 uc_338.14-201ENST00000613162 166 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AL773524.1-201ENST00000614065 229 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AC009233.1-201ENST00000616477 371 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 AC024581.2-201ENST00000619986 252 ntBASIC1.49□□□□□ -2.17
H3F3AP84243 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
H3F3AP84243 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
H3F3AP84243 RNU6-997P-201ENST00000384725 107 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 MCTS2P-201ENST00000394552 546 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 RNU4-27P-201ENST00000410889 139 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.48□□□□□ -2.17
H3F3AP84243 AL158823.1-201ENST00000418441 478 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 AL139421.1-201ENST00000423010 169 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 SKA2P1-201ENST00000425592 390 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.48□□□□□ -2.17
H3F3AP84243 TRIM60P13-201ENST00000432350 1283 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.48□□□□□ -2.17
H3F3AP84243 MTND6P13-201ENST00000443510 523 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 AC034222.1-201ENST00000494052 532 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.48□□□□□ -2.17
H3F3AP84243 SMURF2P1-201ENST00000514992 481 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 SNORD19.2-201ENST00000516978 73 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 SNORA76.2-201ENST00000517095 137 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 RNA5SP290-201ENST00000517133 127 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.48□□□□□ -2.17
H3F3AP84243 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.48□□□□□ -2.17
H3F3AP84243 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.48□□□□□ -2.17
H3F3AP84243 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.48□□□□□ -2.17
H3F3AP84243 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.48□□□□□ -2.17
H3F3AP84243 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.48□□□□□ -2.17
H3F3AP84243 MIR502-201ENST00000606349 86 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 AL118556.2-201ENST00000614375 824 ntBASIC1.48□□□□□ -2.17
H3F3AP84243 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
H3F3AP84243 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
H3F3AP84243 UBE2L2-201ENST00000254302 429 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 SNORA23-201ENST00000365128 182 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.47□□□□□ -2.17
H3F3AP84243 SUGT1P1-201ENST00000379514 476 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 RNU6-748P-201ENST00000384648 107 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
H3F3AP84243 RNU6-516P-201ENST00000411381 104 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 AL158050.1-201ENST00000416077 457 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 AC244636.1-201ENST00000421152 228 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 AL591806.2-201ENST00000433122 173 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.47□□□□□ -2.17
H3F3AP84243 AC093155.1-201ENST00000440164 826 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 MTCYBP11-201ENST00000447254 1109 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 AP001324.2-201ENST00000461163 319 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.47□□□□□ -2.17
H3F3AP84243 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.47□□□□□ -2.17
H3F3AP84243 AL160314.1-201ENST00000490836 438 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.47□□□□□ -2.17
H3F3AP84243 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.47□□□□□ -2.17
H3F3AP84243 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
H3F3AP84243 SNORA25.15-201ENST00000516487 89 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 AC022861.1-201ENST00000522981 663 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.47□□□□□ -2.17
H3F3AP84243 AC233702.2-202ENST00000562547 291 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 MTCYBP22-201ENST00000603788 447 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 KATNBL1P5-201ENST00000605015 517 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 AC004805.2-201ENST00000605382 482 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 AC239868.4-201ENST00000608318 671 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 AC002550.2-201ENST00000621246 394 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 AC087821.2-201ENST00000637086 450 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 MKKS-204ENST00000639674 192 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 AC005539.1-201ENST00000443768 1479 ntBASIC1.47□□□□□ -2.17
H3F3AP84243 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.47□□□□□ -2.17
H3F3AP84243 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.46□□□□□ -2.18
H3F3AP84243 RNA5SP363-201ENST00000365072 115 ntBASIC1.46□□□□□ -2.18
H3F3AP84243 RNU6-549P-201ENST00000384433 107 ntBASIC1.46□□□□□ -2.18
H3F3AP84243 Y_RNA.548-201ENST00000384656 105 ntBASIC1.46□□□□□ -2.18
H3F3AP84243 OR9R1P-201ENST00000412200 877 ntBASIC1.46□□□□□ -2.18
H3F3AP84243 AL451054.2-201ENST00000420896 202 ntBASIC1.46□□□□□ -2.18
H3F3AP84243 AL161651.1-201ENST00000440882 223 ntBASIC1.46□□□□□ -2.18
H3F3AP84243 AC117522.2-201ENST00000510049 657 ntBASIC1.46□□□□□ -2.18
H3F3AP84243 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.46□□□□□ -2.18
H3F3AP84243 SNORA25.11-201ENST00000515935 105 ntBASIC1.46□□□□□ -2.18
H3F3AP84243 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.46□□□□□ -2.18
H3F3AP84243 AP002906.1-201ENST00000603405 233 ntBASIC1.46□□□□□ -2.18
H3F3AP84243 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
H3F3AP84243 MIR5739-201ENST00000619803 80 ntBASIC1.46□□□□□ -2.18
H3F3AP84243 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
H3F3AP84243 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
H3F3AP84243 ZNF876P-202ENST00000398732 1485 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 AL138713.1-201ENST00000624026 2130 ntBASIC1.45□□□□□ -2.18
H3F3AP84243 RNU6-28P-201ENST00000362378 107 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms