Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NKX6-1P78426 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.65□□□□□ -1.82
NKX6-1P78426 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NKX6-1P78426 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
NKX6-1P78426 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NKX6-1P78426 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NKX6-1P78426 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX6-1P78426 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NKX6-1P78426 SNORA71.3-201ENST00000362582 128 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 RNU6-266P-201ENST00000364225 107 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
NKX6-1P78426 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NKX6-1P78426 HSPE1P12-201ENST00000412576 301 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX6-1P78426 VN1R36P-201ENST00000414936 291 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 AC007390.1-201ENST00000415722 356 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NKX6-1P78426 RBMY1KP-201ENST00000423480 476 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 AC018644.1-201ENST00000429934 551 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 AL158071.1-201ENST00000430315 461 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 BRK1P2-201ENST00000442875 223 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 ANP32BP2-201ENST00000454525 545 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX6-1P78426 PPIAP15-201ENST00000479662 484 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX6-1P78426 RNU6-273P-201ENST00000516937 96 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 AC087369.1-201ENST00000520775 996 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX6-1P78426 AC011602.1-201ENST00000546484 331 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 MIR5692C1-201ENST00000585309 91 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 AL606490.9-201ENST00000603331 271 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 AC002044.1-201ENST00000606707 158 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
NKX6-1P78426 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX6-1P78426 AL359697.1-201ENST00000624879 587 ntBASIC3.65□□□□□ -1.83
NKX6-1P78426 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX6-1P78426 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.65□□□□□ -1.83
NKX6-1P78426 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
NKX6-1P78426 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
NKX6-1P78426 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NKX6-1P78426 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX6-1P78426 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NKX6-1P78426 Y_RNA.301-201ENST00000364990 103 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 RNU6-1035P-201ENST00000384477 107 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 MIR449B-201ENST00000384995 97 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.64□□□□□ -1.83
NKX6-1P78426 AL139396.1-201ENST00000421137 167 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 AC007560.1-201ENST00000426912 237 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.64□□□□□ -1.83
NKX6-1P78426 AC005019.1-201ENST00000436455 431 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX6-1P78426 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.64□□□□□ -1.83
NKX6-1P78426 AL590664.1-201ENST00000448065 339 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 NDUFB1P2-201ENST00000449477 176 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 RPL12P25-201ENST00000455592 494 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 HMGN2P7-201ENST00000456186 273 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 RNA5SP246-201ENST00000458909 119 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 SNRPGP3-201ENST00000469405 227 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.64□□□□□ -1.83
NKX6-1P78426 AC139453.3-201ENST00000493276 369 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX6-1P78426 AC006445.2-201ENST00000510061 472 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 RPL39P5-202ENST00000512505 151 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 Y_RNA.675-201ENST00000516389 149 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 RNU6-572P-201ENST00000516724 80 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX6-1P78426 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX6-1P78426 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 RN7SL703P-201ENST00000578485 302 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 MIR3942-201ENST00000585264 109 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.64□□□□□ -1.83
NKX6-1P78426 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.64□□□□□ -1.83
NKX6-1P78426 AL645944.1-201ENST00000603857 493 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX6-1P78426 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX6-1P78426 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX6-1P78426 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
NKX6-1P78426 U6.99-201ENST00000637524 83 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 AC112487.2-201ENST00000637950 304 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 NCAPGP1-201ENST00000505112 1814 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 AC106871.1-201ENST00000568324 3102 ntBASIC3.64□□□□□ -1.83
NKX6-1P78426 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NKX6-1P78426 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
NKX6-1P78426 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NKX6-1P78426 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.64□□□□□ -1.83
NKX6-1P78426 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.64□□□□□ -1.83
NKX6-1P78426 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NKX6-1P78426 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NKX6-1P78426 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
NKX6-1P78426 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NKX6-1P78426 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX6-1P78426 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
NKX6-1P78426 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NKX6-1P78426 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.63□□□□□ -1.83
NKX6-1P78426 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.63□□□□□ -1.83
NKX6-1P78426 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
NKX6-1P78426 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
NKX6-1P78426 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
NKX6-1P78426 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms