Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.05□□□□□ -1.92
CLDN20P56880 GMFBP1-201ENST00000467831 427 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN20P56880 AL117351.2-201ENST00000513571 157 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 RNU6-1281P-201ENST00000516223 105 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 Y_RNA.689-201ENST00000516589 107 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 SNORA70.19-201ENST00000516717 90 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN20P56880 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN20P56880 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN20P56880 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.05□□□□□ -1.92
CLDN20P56880 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN20P56880 AC008752.3-201ENST00000588113 712 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.05□□□□□ -1.92
CLDN20P56880 AL162413.1-201ENST00000603198 110 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AC098826.3-201ENST00000603823 466 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AC022893.3-201ENST00000607665 437 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 PLCE1P1-201ENST00000622094 305 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN20P56880 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN20P56880 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.05□□□□□ -1.92
CLDN20P56880 AC118273.1-201ENST00000525324 3006 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN20P56880 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN20P56880 AC006020.1-201ENST00000420179 1854 ntBASIC3.05□□□□□ -1.92
CLDN20P56880 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
CLDN20P56880 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.04□□□□□ -1.92
CLDN20P56880 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN20P56880 AF117829.1-206ENST00000621883 3802 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN20P56880 AC008264.2-201ENST00000610193 3731 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC103710.2-202ENST00000641454 2853 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 RPL7P26-201ENST00000333817 754 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 SNORA70.4-201ENST00000365509 134 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 SNORA69-201ENST00000383895 132 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 Y_RNA.576-201ENST00000384781 102 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 MIR591-201ENST00000385290 95 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC092809.3-201ENST00000415453 231 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN20P56880 MTCO1P20-201ENST00000425366 358 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN20P56880 CALM2P2-201ENST00000428512 440 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC000111.3-201ENST00000433478 193 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AL596276.1-201ENST00000434465 418 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN20P56880 PIGFP3-201ENST00000441918 722 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 MTND1P18-201ENST00000448191 573 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN20P56880 MTAPP1-201ENST00000489154 819 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC104806.1-201ENST00000508720 308 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC098591.2-201ENST00000510152 315 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 APOOP4-201ENST00000513530 597 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN20P56880 RNU6-123P-201ENST00000516163 102 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 RNU6-1282P-201ENST00000516735 96 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 RNA5SP471-201ENST00000516971 106 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 CASP1P1-201ENST00000526345 212 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN20P56880 RANP3-201ENST00000530970 276 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.04□□□□□ -1.92
CLDN20P56880 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN20P56880 AC006504.3-201ENST00000586818 523 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC008521.1-201ENST00000587471 187 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.04□□□□□ -1.92
CLDN20P56880 AL161798.1-201ENST00000604630 131 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AL390240.1-201ENST00000612950 384 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC130324.3-201ENST00000614165 542 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AL354950.2-201ENST00000617939 290 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 AC073476.4-201ENST00000628409 72 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 SNORA50A-202ENST00000629536 136 ntBASIC3.04□□□□□ -1.92
CLDN20P56880 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
CLDN20P56880 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.04□□□□□ -1.92
CLDN20P56880 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
CLDN20P56880 AL049641.1-201ENST00000441055 1948 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AL356274.2-201ENST00000624379 3752 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN20P56880 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
CLDN20P56880 RNU6-1090P-201ENST00000364065 94 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 Y_RNA.255-201ENST00000364581 97 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 RNA5SP267-201ENST00000364893 126 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 Y_RNA.453-201ENST00000384223 109 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 Y_RNA.573-201ENST00000384763 105 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 RPL21P3-201ENST00000395517 478 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 MIR1277-201ENST00000408536 78 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 RNU2-29P-201ENST00000410423 189 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC080125.1-201ENST00000414888 684 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN20P56880 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC006946.1-201ENST00000429106 328 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN20P56880 NEK4P1-201ENST00000433383 879 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC092573.2-201ENST00000434546 243 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN20P56880 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.03□□□□□ -1.92
CLDN20P56880 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN20P56880 CACYBPP2-201ENST00000453625 678 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.03□□□□□ -1.92
CLDN20P56880 AL162395.1-201ENST00000457882 422 ntBASIC3.03□□□□□ -1.92
CLDN20P56880 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.03□□□□□ -1.92
CLDN20P56880 RNA5SP310-201ENST00000459084 116 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms