Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
NEK3P51956 CALM2P3-201ENST00000400429 449 ntBASIC3.67□□□□□ -1.82
NEK3P51956 UBE2V1P10-201ENST00000414685 269 ntBASIC3.67□□□□□ -1.82
NEK3P51956 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.67□□□□□ -1.82
NEK3P51956 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.67□□□□□ -1.82
NEK3P51956 MYL8P-204ENST00000431574 518 ntBASIC3.67□□□□□ -1.82
NEK3P51956 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.67□□□□□ -1.82
NEK3P51956 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.67□□□□□ -1.82
NEK3P51956 ATP5C1P1-201ENST00000441945 895 ntBASIC3.67□□□□□ -1.82
NEK3P51956 NDUFB1P2-201ENST00000449477 176 ntBASIC3.67□□□□□ -1.82
NEK3P51956 AC093392.2-201ENST00000450682 337 ntBASIC3.67□□□□□ -1.82
NEK3P51956 AL162395.1-201ENST00000457882 422 ntBASIC3.67□□□□□ -1.82
NEK3P51956 RPL21P41-201ENST00000459863 264 ntBASIC3.67□□□□□ -1.82
NEK3P51956 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.67□□□□□ -1.82
NEK3P51956 AC008716.1-201ENST00000511084 513 ntBASIC3.67□□□□□ -1.82
NEK3P51956 RNU6-314P-201ENST00000516574 104 ntBASIC3.67□□□□□ -1.82
NEK3P51956 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.67□□□□□ -1.82
NEK3P51956 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.67□□□□□ -1.82
NEK3P51956 AC103843.2-201ENST00000530523 682 ntBASIC3.67□□□□□ -1.82
NEK3P51956 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.67□□□□□ -1.82
NEK3P51956 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.67□□□□□ -1.82
NEK3P51956 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.67□□□□□ -1.82
NEK3P51956 AL157687.1-201ENST00000554853 619 ntBASIC3.67□□□□□ -1.82
NEK3P51956 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.67□□□□□ -1.82
NEK3P51956 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.67□□□□□ -1.82
NEK3P51956 MIR5047-201ENST00000579212 100 ntBASIC3.67□□□□□ -1.82
NEK3P51956 AC008752.3-201ENST00000588113 712 ntBASIC3.67□□□□□ -1.82
NEK3P51956 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.67□□□□□ -1.82
NEK3P51956 AC024220.1-201ENST00000603675 484 ntBASIC3.67□□□□□ -1.82
NEK3P51956 U6.42-201ENST00000618440 107 ntBASIC3.67□□□□□ -1.82
NEK3P51956 AC068792.1-201ENST00000621354 417 ntBASIC3.67□□□□□ -1.82
NEK3P51956 AL732372.2-225ENST00000642124 456 ntBASIC3.67□□□□□ -1.82
NEK3P51956 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NEK3P51956 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
NEK3P51956 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NEK3P51956 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
NEK3P51956 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NEK3P51956 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.66□□□□□ -1.82
NEK3P51956 SNORD9-201ENST00000362566 104 ntBASIC3.66□□□□□ -1.82
NEK3P51956 Y_RNA.516-201ENST00000384541 124 ntBASIC3.66□□□□□ -1.82
NEK3P51956 MIR218-2-201ENST00000385006 110 ntBASIC3.66□□□□□ -1.82
NEK3P51956 EEF1A1P40-201ENST00000412883 573 ntBASIC3.66□□□□□ -1.82
NEK3P51956 AL031779.1-201ENST00000415663 330 ntBASIC3.66□□□□□ -1.82
NEK3P51956 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.66□□□□□ -1.82
NEK3P51956 AL606489.2-201ENST00000433886 234 ntBASIC3.66□□□□□ -1.82
NEK3P51956 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.66□□□□□ -1.82
NEK3P51956 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.66□□□□□ -1.82
NEK3P51956 AC016691.1-201ENST00000441321 413 ntBASIC3.66□□□□□ -1.82
NEK3P51956 FDX1P2-201ENST00000450769 375 ntBASIC3.66□□□□□ -1.82
NEK3P51956 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.66□□□□□ -1.82
NEK3P51956 AC139453.3-201ENST00000493276 369 ntBASIC3.66□□□□□ -1.82
NEK3P51956 AC079140.5-201ENST00000507882 310 ntBASIC3.66□□□□□ -1.82
NEK3P51956 AC110768.1-201ENST00000509222 400 ntBASIC3.66□□□□□ -1.82
NEK3P51956 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.66□□□□□ -1.82
NEK3P51956 AC025755.1-201ENST00000521306 278 ntBASIC3.66□□□□□ -1.82
NEK3P51956 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.66□□□□□ -1.82
NEK3P51956 AP005435.4-201ENST00000529514 284 ntBASIC3.66□□□□□ -1.82
NEK3P51956 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.66□□□□□ -1.82
NEK3P51956 MIR4782-201ENST00000577987 79 ntBASIC3.66□□□□□ -1.82
NEK3P51956 MIR3944-201ENST00000581277 108 ntBASIC3.66□□□□□ -1.82
NEK3P51956 MIR3941-201ENST00000582572 103 ntBASIC3.66□□□□□ -1.82
NEK3P51956 HMGN2P15-201ENST00000585707 270 ntBASIC3.66□□□□□ -1.82
NEK3P51956 BNIP3P22-201ENST00000593399 556 ntBASIC3.66□□□□□ -1.82
NEK3P51956 AC019176.2-201ENST00000611579 315 ntBASIC3.66□□□□□ -1.82
NEK3P51956 AC013562.2-201ENST00000611632 603 ntBASIC3.66□□□□□ -1.82
NEK3P51956 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.66□□□□□ -1.82
NEK3P51956 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NEK3P51956 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NEK3P51956 AC099654.7-201ENST00000635788 2127 ntBASIC3.65□□□□□ -1.82
NEK3P51956 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NEK3P51956 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
NEK3P51956 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NEK3P51956 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.65□□□□□ -1.82
NEK3P51956 AC007823.1-201ENST00000569932 1566 ntBASIC3.65□□□□□ -1.82
NEK3P51956 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NEK3P51956 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NEK3P51956 AP002088.1-201ENST00000382740 395 ntBASIC3.65□□□□□ -1.83
NEK3P51956 RNU6-116P-201ENST00000384042 109 ntBASIC3.65□□□□□ -1.83
NEK3P51956 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.65□□□□□ -1.83
NEK3P51956 CYCSP4-201ENST00000429682 331 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AL158071.1-201ENST00000430315 461 ntBASIC3.65□□□□□ -1.83
NEK3P51956 RPL7P54-201ENST00000438336 674 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AL078601.1-201ENST00000444542 271 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.65□□□□□ -1.83
NEK3P51956 SNRPFP3-201ENST00000457792 225 ntBASIC3.65□□□□□ -1.83
NEK3P51956 HMGB1P30-201ENST00000492455 606 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AC092436.1-201ENST00000506450 503 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AC009901.1-201ENST00000506703 541 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.65□□□□□ -1.83
NEK3P51956 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.65□□□□□ -1.83
NEK3P51956 AL512360.1-201ENST00000555346 234 ntBASIC3.65□□□□□ -1.83
NEK3P51956 TGIF1P1-201ENST00000558095 802 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.65□□□□□ -1.83
NEK3P51956 TPRKBP2-201ENST00000565969 475 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AC025281.1-201ENST00000567026 265 ntBASIC3.65□□□□□ -1.83
NEK3P51956 MTATP6P3-201ENST00000581686 676 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.65□□□□□ -1.83
NEK3P51956 AL645944.1-201ENST00000603857 493 ntBASIC3.65□□□□□ -1.83
NEK3P51956 MTND4LP5-201ENST00000605152 292 ntBASIC3.65□□□□□ -1.83
NEK3P51956 AC084757.4-201ENST00000616350 526 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms