Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCN3P51790 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.32□□□□□ -1.88
CLCN3P51790 AC133104.1-201ENST00000429100 218 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 RPL31P35-201ENST00000431058 377 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 AL139132.1-201ENST00000431587 344 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCN3P51790 AC009237.8-201ENST00000445492 379 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 RPL37P4-201ENST00000448908 268 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 RPL31P60-201ENST00000478450 367 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 RN7SL20P-201ENST00000488827 297 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.32□□□□□ -1.88
CLCN3P51790 RNA5SP217-201ENST00000515959 91 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 RNU6-927P-201ENST00000516199 100 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.32□□□□□ -1.88
CLCN3P51790 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCN3P51790 OR5AQ1P-201ENST00000527596 927 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCN3P51790 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCN3P51790 HMGB1P33-201ENST00000563485 527 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCN3P51790 AC009570.1-201ENST00000609599 745 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 AL161734.1-201ENST00000609720 557 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 AC007318.2-201ENST00000620999 243 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.32□□□□□ -1.88
CLCN3P51790 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.32□□□□□ -1.88
CLCN3P51790 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CLCN3P51790 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.31□□□□□ -1.88
CLCN3P51790 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLCN3P51790 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CLCN3P51790 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLCN3P51790 Y_RNA.9-201ENST00000362354 101 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 Y_RNA.372-201ENST00000365599 102 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CLCN3P51790 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLCN3P51790 RNU6-1197P-201ENST00000391183 107 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 MIR1277-201ENST00000408536 78 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLCN3P51790 RAC1P6-201ENST00000423911 575 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCN3P51790 OR2AS1P-201ENST00000427827 319 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 AC073464.1-201ENST00000429823 534 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCN3P51790 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCN3P51790 RPL36AP6-201ENST00000435770 321 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 SNRPEP4-201ENST00000435815 279 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 HMGB3P12-201ENST00000438745 556 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 CBWD4P-201ENST00000445695 655 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCN3P51790 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.31□□□□□ -1.88
CLCN3P51790 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.31□□□□□ -1.88
CLCN3P51790 RPS29P25-201ENST00000481709 171 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 AC009646.1-201ENST00000510455 318 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLCN3P51790 SNORA31.3-201ENST00000516029 96 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 RNU6-1092P-201ENST00000516955 87 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCN3P51790 AC118273.2-201ENST00000532092 465 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 AP003034.1-201ENST00000534621 422 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCN3P51790 ARL2BPP2-201ENST00000550907 489 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 AL157687.1-201ENST00000554853 619 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.31□□□□□ -1.88
CLCN3P51790 AC006504.3-201ENST00000586818 523 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.31□□□□□ -1.88
CLCN3P51790 AC104458.1-201ENST00000608243 463 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 MIR7106-201ENST00000612419 65 ntBASIC3.31□□□□□ -1.88
CLCN3P51790 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
CLCN3P51790 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLCN3P51790 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLCN3P51790 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLCN3P51790 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CLCN3P51790 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.3□□□□□ -1.88
CLCN3P51790 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLCN3P51790 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CLCN3P51790 AC073343.1-201ENST00000328239 651 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 Y_RNA.1-201ENST00000352915 104 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 RNU6-181P-201ENST00000363225 107 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 Y_RNA.303-201ENST00000364998 94 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 RNU4-12P-201ENST00000365233 139 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 RNU6-169P-201ENST00000365336 107 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.3□□□□□ -1.88
CLCN3P51790 RNU6-741P-201ENST00000383889 107 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 FGF7P8-201ENST00000402994 292 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 RNU2-36P-201ENST00000410361 191 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 AC007283.2-201ENST00000424739 197 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 MED13P1-201ENST00000428342 171 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.3□□□□□ -1.88
CLCN3P51790 MTCO3P18-201ENST00000440206 761 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 MTATP6P30-201ENST00000443540 664 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 WASF1P1-201ENST00000447560 1131 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.3□□□□□ -1.88
CLCN3P51790 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.3□□□□□ -1.88
CLCN3P51790 AC087588.1-201ENST00000462203 316 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.3□□□□□ -1.88
CLCN3P51790 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.3□□□□□ -1.88
CLCN3P51790 RNU6-1256P-201ENST00000516539 103 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 RNU6-445P-201ENST00000516949 107 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 AP000889.1-201ENST00000530968 660 ntBASIC3.3□□□□□ -1.88
CLCN3P51790 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms