Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
TUBP50607 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TUBP50607 AP003122.5-201ENST00000527668 3766 ntBASIC3.36□□□□□ -1.87
TUBP50607 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.36□□□□□ -1.87
TUBP50607 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
TUBP50607 AC093831.2-201ENST00000624393 3427 ntBASIC3.36□□□□□ -1.87
TUBP50607 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.36□□□□□ -1.87
TUBP50607 RNA5SP374-201ENST00000362939 125 ntBASIC3.36□□□□□ -1.87
TUBP50607 RNU6-884P-201ENST00000363889 107 ntBASIC3.36□□□□□ -1.87
TUBP50607 DYNLT3P1-201ENST00000378574 347 ntBASIC3.36□□□□□ -1.87
TUBP50607 CD24P4-201ENST00000382840 243 ntBASIC3.36□□□□□ -1.87
TUBP50607 RNU1-73P-201ENST00000383971 164 ntBASIC3.36□□□□□ -1.87
TUBP50607 RNA5SP354-201ENST00000391247 136 ntBASIC3.36□□□□□ -1.87
TUBP50607 RNU2-16P-201ENST00000410712 136 ntBASIC3.36□□□□□ -1.87
TUBP50607 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.36□□□□□ -1.87
TUBP50607 SDCBPP3-201ENST00000419629 891 ntBASIC3.36□□□□□ -1.87
TUBP50607 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.36□□□□□ -1.87
TUBP50607 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.36□□□□□ -1.87
TUBP50607 AC098831.1-201ENST00000440661 216 ntBASIC3.36□□□□□ -1.87
TUBP50607 FABP5P13-201ENST00000452144 328 ntBASIC3.36□□□□□ -1.87
TUBP50607 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.36□□□□□ -1.87
TUBP50607 RPL12P25-201ENST00000455592 494 ntBASIC3.36□□□□□ -1.87
TUBP50607 RN7SL863P-201ENST00000462370 296 ntBASIC3.36□□□□□ -1.87
TUBP50607 RPS3AP17-201ENST00000472594 777 ntBASIC3.36□□□□□ -1.87
TUBP50607 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TUBP50607 AC006483.1-201ENST00000487308 313 ntBASIC3.36□□□□□ -1.87
TUBP50607 AC105252.1-201ENST00000503089 286 ntBASIC3.36□□□□□ -1.87
TUBP50607 AC109927.2-201ENST00000506416 303 ntBASIC3.36□□□□□ -1.87
TUBP50607 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.36□□□□□ -1.87
TUBP50607 AC108078.2-201ENST00000510750 236 ntBASIC3.36□□□□□ -1.87
TUBP50607 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.36□□□□□ -1.87
TUBP50607 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.36□□□□□ -1.87
TUBP50607 RNU6-914P-201ENST00000516749 109 ntBASIC3.36□□□□□ -1.87
TUBP50607 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.36□□□□□ -1.87
TUBP50607 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.36□□□□□ -1.87
TUBP50607 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.36□□□□□ -1.87
TUBP50607 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.36□□□□□ -1.87
TUBP50607 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.36□□□□□ -1.87
TUBP50607 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.36□□□□□ -1.87
TUBP50607 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.36□□□□□ -1.87
TUBP50607 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.36□□□□□ -1.87
TUBP50607 AC005000.2-201ENST00000605468 310 ntBASIC3.36□□□□□ -1.87
TUBP50607 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TUBP50607 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC3.36□□□□□ -1.87
TUBP50607 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.36□□□□□ -1.87
TUBP50607 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.36□□□□□ -1.87
TUBP50607 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TUBP50607 AC008264.2-201ENST00000610193 3731 ntBASIC3.35□□□□□ -1.87
TUBP50607 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TUBP50607 RNA5SP383-201ENST00000362934 120 ntBASIC3.35□□□□□ -1.87
TUBP50607 RNU6-1120P-201ENST00000362988 108 ntBASIC3.35□□□□□ -1.87
TUBP50607 RNU6-778P-201ENST00000363269 103 ntBASIC3.35□□□□□ -1.87
TUBP50607 Y_RNA.359-201ENST00000365498 102 ntBASIC3.35□□□□□ -1.87
TUBP50607 SNORA7.4-201ENST00000384249 137 ntBASIC3.35□□□□□ -1.87
TUBP50607 RNU6-606P-201ENST00000384721 111 ntBASIC3.35□□□□□ -1.87
TUBP50607 MIR454-201ENST00000390180 115 ntBASIC3.35□□□□□ -1.87
TUBP50607 GSTA9P-201ENST00000406231 611 ntBASIC3.35□□□□□ -1.87
TUBP50607 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBP50607 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBP50607 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBP50607 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBP50607 MTCO2P7-201ENST00000446518 666 ntBASIC3.35□□□□□ -1.87
TUBP50607 AC079448.1-201ENST00000449377 373 ntBASIC3.35□□□□□ -1.87
TUBP50607 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBP50607 RPL27AP5-201ENST00000469428 449 ntBASIC3.35□□□□□ -1.87
TUBP50607 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.35□□□□□ -1.87
TUBP50607 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.35□□□□□ -1.87
TUBP50607 HMGB1P29-201ENST00000505659 499 ntBASIC3.35□□□□□ -1.87
TUBP50607 RNU1-143P-201ENST00000516296 146 ntBASIC3.35□□□□□ -1.87
TUBP50607 AP003122.3-201ENST00000526316 255 ntBASIC3.35□□□□□ -1.87
TUBP50607 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.35□□□□□ -1.87
TUBP50607 AC084851.1-201ENST00000529105 249 ntBASIC3.35□□□□□ -1.87
TUBP50607 OR4R1P-201ENST00000529879 463 ntBASIC3.35□□□□□ -1.87
TUBP50607 OR5B19P-201ENST00000531766 928 ntBASIC3.35□□□□□ -1.87
TUBP50607 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBP50607 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
TUBP50607 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.35□□□□□ -1.87
TUBP50607 AC005498.1-201ENST00000592125 465 ntBASIC3.35□□□□□ -1.87
TUBP50607 RPL23AP78-201ENST00000599928 470 ntBASIC3.35□□□□□ -1.87
TUBP50607 U1.23-201ENST00000610293 146 ntBASIC3.35□□□□□ -1.87
TUBP50607 AC012409.4-201ENST00000612923 249 ntBASIC3.35□□□□□ -1.87
TUBP50607 RNU1-68P-201ENST00000615382 146 ntBASIC3.35□□□□□ -1.87
TUBP50607 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
TUBP50607 U1.39-201ENST00000621562 146 ntBASIC3.35□□□□□ -1.87
TUBP50607 U6.114-201ENST00000636407 96 ntBASIC3.35□□□□□ -1.87
TUBP50607 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
TUBP50607 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TUBP50607 AC093010.3-201ENST00000570269 15214 ntBASIC3.34□□□□□ -1.87
TUBP50607 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
TUBP50607 AC110491.1-201ENST00000562191 2010 ntBASIC3.34□□□□□ -1.87
TUBP50607 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TUBP50607 AL021368.2-201ENST00000606125 5352 ntBASIC3.34□□□□□ -1.87
TUBP50607 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TUBP50607 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TUBP50607 RNU6-525P-201ENST00000363685 104 ntBASIC3.34□□□□□ -1.87
TUBP50607 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.34□□□□□ -1.87
TUBP50607 RNU6-74P-201ENST00000384235 107 ntBASIC3.34□□□□□ -1.87
TUBP50607 SNORA24.1-201ENST00000384401 135 ntBASIC3.34□□□□□ -1.87
TUBP50607 RNU6-456P-201ENST00000384493 107 ntBASIC3.34□□□□□ -1.87
TUBP50607 MIR23A-201ENST00000385245 73 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms