Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 MIR3199-1-201ENST00000582434 88 ntBASIC2.05□□□□□ -2.08
RFC3P40938 MIR5007-201ENST00000583098 95 ntBASIC2.05□□□□□ -2.08
RFC3P40938 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.05□□□□□ -2.08
RFC3P40938 AL161798.1-201ENST00000604630 131 ntBASIC2.05□□□□□ -2.08
RFC3P40938 DUSP12P1-201ENST00000612874 516 ntBASIC2.05□□□□□ -2.08
RFC3P40938 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.05□□□□□ -2.08
RFC3P40938 AC245884.12-201ENST00000615364 59 ntBASIC2.05□□□□□ -2.08
RFC3P40938 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
RFC3P40938 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RFC3P40938 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RFC3P40938 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
RFC3P40938 SNORA67.3-201ENST00000384366 140 ntBASIC2.04□□□□□ -2.08
RFC3P40938 SNORA64-201ENST00000384674 134 ntBASIC2.04□□□□□ -2.08
RFC3P40938 MIR19A-201ENST00000384878 82 ntBASIC2.04□□□□□ -2.08
RFC3P40938 AL139397.2-201ENST00000404529 772 ntBASIC2.04□□□□□ -2.08
RFC3P40938 RNU2-68P-201ENST00000410878 191 ntBASIC2.04□□□□□ -2.08
RFC3P40938 RNU4-22P-201ENST00000411058 166 ntBASIC2.04□□□□□ -2.08
RFC3P40938 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.04□□□□□ -2.08
RFC3P40938 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.04□□□□□ -2.08
RFC3P40938 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.04□□□□□ -2.08
RFC3P40938 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.04□□□□□ -2.08
RFC3P40938 IPO7P1-201ENST00000442031 636 ntBASIC2.04□□□□□ -2.08
RFC3P40938 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.04□□□□□ -2.08
RFC3P40938 RNU7-59P-201ENST00000459101 61 ntBASIC2.04□□□□□ -2.08
RFC3P40938 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.04□□□□□ -2.08
RFC3P40938 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.04□□□□□ -2.08
RFC3P40938 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.04□□□□□ -2.08
RFC3P40938 AP000873.5-201ENST00000533906 236 ntBASIC2.04□□□□□ -2.08
RFC3P40938 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.04□□□□□ -2.08
RFC3P40938 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.04□□□□□ -2.08
RFC3P40938 AC078814.3-201ENST00000553036 491 ntBASIC2.04□□□□□ -2.08
RFC3P40938 AC090079.2-201ENST00000575289 768 ntBASIC2.04□□□□□ -2.08
RFC3P40938 MIR5571-201ENST00000577998 113 ntBASIC2.04□□□□□ -2.08
RFC3P40938 AC098826.3-201ENST00000603823 466 ntBASIC2.04□□□□□ -2.08
RFC3P40938 MTND3P19-201ENST00000603825 345 ntBASIC2.04□□□□□ -2.08
RFC3P40938 AL355598.1-201ENST00000604169 202 ntBASIC2.04□□□□□ -2.08
RFC3P40938 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.04□□□□□ -2.08
RFC3P40938 AC005332.10-201ENST00000612725 619 ntBASIC2.04□□□□□ -2.08
RFC3P40938 AL049777.1-201ENST00000622740 518 ntBASIC2.04□□□□□ -2.08
RFC3P40938 AP002371.2-201ENST00000624450 503 ntBASIC2.04□□□□□ -2.08
RFC3P40938 AL160394.1-201ENST00000624765 724 ntBASIC2.04□□□□□ -2.08
RFC3P40938 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.04□□□□□ -2.08
RFC3P40938 AP000553.5-201ENST00000641933 54 ntBASIC2.04□□□□□ -2.08
RFC3P40938 MIRLET7G-201ENST00000362280 84 ntBASIC2.03□□□□□ -2.08
RFC3P40938 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RFC3P40938 AL359634.1-202ENST00000404721 284 ntBASIC2.03□□□□□ -2.08
RFC3P40938 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.03□□□□□ -2.08
RFC3P40938 AL109913.1-201ENST00000421173 514 ntBASIC2.03□□□□□ -2.08
RFC3P40938 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.03□□□□□ -2.08
RFC3P40938 FTH1P25-201ENST00000447665 469 ntBASIC2.03□□□□□ -2.08
RFC3P40938 HMGN2P10-201ENST00000448085 265 ntBASIC2.03□□□□□ -2.08
RFC3P40938 FDX1P2-201ENST00000450769 375 ntBASIC2.03□□□□□ -2.08
RFC3P40938 FABP5P15-201ENST00000453566 214 ntBASIC2.03□□□□□ -2.08
RFC3P40938 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.03□□□□□ -2.08
RFC3P40938 ANKRD26P4-201ENST00000455755 950 ntBASIC2.03□□□□□ -2.08
RFC3P40938 AC005410.1-202ENST00000460347 485 ntBASIC2.03□□□□□ -2.08
RFC3P40938 AC010587.2-201ENST00000511727 448 ntBASIC2.03□□□□□ -2.08
RFC3P40938 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.03□□□□□ -2.08
RFC3P40938 AC025755.1-201ENST00000521306 278 ntBASIC2.03□□□□□ -2.08
RFC3P40938 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.03□□□□□ -2.08
RFC3P40938 AC021739.1-201ENST00000559631 174 ntBASIC2.03□□□□□ -2.08
RFC3P40938 AC023813.2-201ENST00000564321 469 ntBASIC2.03□□□□□ -2.08
RFC3P40938 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.03□□□□□ -2.08
RFC3P40938 RPS3AP23-202ENST00000574601 686 ntBASIC2.03□□□□□ -2.08
RFC3P40938 RPP40P2-201ENST00000603596 712 ntBASIC2.03□□□□□ -2.08
RFC3P40938 AC025588.2-201ENST00000604851 466 ntBASIC2.03□□□□□ -2.08
RFC3P40938 AL021997.1-201ENST00000605757 193 ntBASIC2.03□□□□□ -2.08
RFC3P40938 AF129408.1-201ENST00000608767 431 ntBASIC2.03□□□□□ -2.08
RFC3P40938 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RFC3P40938 AC010678.1-201ENST00000614118 713 ntBASIC2.03□□□□□ -2.08
RFC3P40938 MIR6766-201ENST00000622641 72 ntBASIC2.03□□□□□ -2.08
RFC3P40938 AC112204.3-201ENST00000623822 332 ntBASIC2.03□□□□□ -2.08
RFC3P40938 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
RFC3P40938 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RFC3P40938 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
RFC3P40938 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.03□□□□□ -2.08
RFC3P40938 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.03□□□□□ -2.09
RFC3P40938 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFC3P40938 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.02□□□□□ -2.09
RFC3P40938 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.02□□□□□ -2.09
RFC3P40938 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.02□□□□□ -2.09
RFC3P40938 RNA5SP37-201ENST00000365420 130 ntBASIC2.02□□□□□ -2.09
RFC3P40938 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFC3P40938 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFC3P40938 AL023284.1-201ENST00000403956 276 ntBASIC2.02□□□□□ -2.09
RFC3P40938 SNORA11.4-201ENST00000408823 129 ntBASIC2.02□□□□□ -2.09
RFC3P40938 RNU4-26P-201ENST00000410270 107 ntBASIC2.02□□□□□ -2.09
RFC3P40938 AL359704.1-201ENST00000411586 781 ntBASIC2.02□□□□□ -2.09
RFC3P40938 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.02□□□□□ -2.09
RFC3P40938 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.02□□□□□ -2.09
RFC3P40938 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.02□□□□□ -2.09
RFC3P40938 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.02□□□□□ -2.09
RFC3P40938 ISCA1P1-201ENST00000426679 387 ntBASIC2.02□□□□□ -2.09
RFC3P40938 AC007560.1-201ENST00000426912 237 ntBASIC2.02□□□□□ -2.09
RFC3P40938 SRIP2-201ENST00000428470 166 ntBASIC2.02□□□□□ -2.09
RFC3P40938 TXNL1P1-201ENST00000429528 554 ntBASIC2.02□□□□□ -2.09
RFC3P40938 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.02□□□□□ -2.09
RFC3P40938 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RFC3P40938 AC005094.1-201ENST00000440420 368 ntBASIC2.02□□□□□ -2.09
RFC3P40938 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms