Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC245517.5-201ENST00000611529 162 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
SHMT2P34897 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.32□□□□□ -2.04
SHMT2P34897 AC092192.1-201ENST00000633154 1018 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 AP003399.1-201ENST00000637534 361 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 AC080100.1-201ENST00000624239 5356 ntBASIC2.32□□□□□ -2.04
SHMT2P34897 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHMT2P34897 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHMT2P34897 MIR21-201ENST00000362134 72 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 RNU1-105P-201ENST00000363470 161 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 RNU6-1284P-201ENST00000363701 100 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.31□□□□□ -2.04
SHMT2P34897 MIR767-201ENST00000390228 109 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 MIR888-201ENST00000401186 77 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 RPS20P2-201ENST00000402520 389 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 RPL17P12-201ENST00000413391 526 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.31□□□□□ -2.04
SHMT2P34897 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SHMT2P34897 AL593851.1-201ENST00000426171 157 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.31□□□□□ -2.04
SHMT2P34897 AC011753.1-201ENST00000451001 220 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 AC108059.3-201ENST00000456388 214 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.31□□□□□ -2.04
SHMT2P34897 RPS29P20-201ENST00000489592 171 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 AC026436.1-201ENST00000510537 270 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 AC118465.1-201ENST00000513820 1271 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 RNU6-1129P-201ENST00000515964 104 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 SNORA3.4-201ENST00000515969 96 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 RNU6-678P-201ENST00000516832 109 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 RNA5SP471-201ENST00000516971 106 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 RNA5SP290-201ENST00000517133 127 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 AC022634.1-201ENST00000520765 532 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.31□□□□□ -2.04
SHMT2P34897 AL359212.1-201ENST00000556608 614 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 MIR5194-201ENST00000582634 120 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 AC007938.3-201ENST00000604965 623 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 MTND4LP5-201ENST00000605152 292 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 AC067747.1-201ENST00000608026 250 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 AC103710.1-201ENST00000610003 901 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 AC017037.3-201ENST00000625016 472 ntBASIC2.31□□□□□ -2.04
SHMT2P34897 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHMT2P34897 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHMT2P34897 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.3□□□□□ -2.04
SHMT2P34897 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.3□□□□□ -2.04
SHMT2P34897 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
SHMT2P34897 RNU6-884P-201ENST00000363889 107 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
SHMT2P34897 AL445529.1-201ENST00000398713 389 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.3□□□□□ -2.04
SHMT2P34897 AF274854.1-201ENST00000413236 615 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 BTF3L4P3-201ENST00000418879 476 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.3□□□□□ -2.04
SHMT2P34897 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.3□□□□□ -2.04
SHMT2P34897 AC011233.1-201ENST00000422812 283 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 AC010099.3-201ENST00000423896 409 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 ELOCP14-201ENST00000428070 331 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.3□□□□□ -2.04
SHMT2P34897 MTND1P28-201ENST00000435623 950 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 SNRPEP9-201ENST00000436794 238 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 ELOCP7-201ENST00000439968 331 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 MTND5P2-201ENST00000442927 1142 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 AC073901.1-201ENST00000462471 408 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 MRPS17P3-201ENST00000465453 385 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 AC128713.1-201ENST00000471495 306 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 MRPL42P6-201ENST00000486397 371 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 LINC00888-204ENST00000487386 421 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 RPL23AP94-201ENST00000512518 302 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 SNORA31.3-201ENST00000516029 96 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 AP003467.2-201ENST00000520175 319 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.3□□□□□ -2.04
SHMT2P34897 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.3□□□□□ -2.04
SHMT2P34897 SUB1P1-201ENST00000524415 382 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 AP003122.3-201ENST00000526316 255 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.3□□□□□ -2.04
SHMT2P34897 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.3□□□□□ -2.04
SHMT2P34897 AC034102.8-201ENST00000615146 484 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 AP002791.1-201ENST00000623291 381 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 AL356266.1-201ENST00000623311 483 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.3□□□□□ -2.04
SHMT2P34897 AC010149.2-201ENST00000637608 315 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
SHMT2P34897 AC069528.2-201ENST00000624849 1991 ntBASIC2.3□□□□□ -2.04
SHMT2P34897 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.3□□□□□ -2.04
SHMT2P34897 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.29□□□□□ -2.04
SHMT2P34897 AC005336.3-201ENST00000623833 2679 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHMT2P34897 RNU6-1167P-201ENST00000363227 94 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 Y_RNA.245-201ENST00000364493 95 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 RNU6-809P-201ENST00000384461 107 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 RNA5SP354-201ENST00000391247 136 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 RNA5SP508-201ENST00000411327 119 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.29□□□□□ -2.04
SHMT2P34897 AC007064.1-201ENST00000412238 351 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.29□□□□□ -2.04
SHMT2P34897 AL139413.1-201ENST00000421309 217 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AL353777.1-201ENST00000425552 326 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.29□□□□□ -2.04
SHMT2P34897 RPL26P9-201ENST00000457466 433 ntBASIC2.29□□□□□ -2.04
SHMT2P34897 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms