Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2□□□□□ -2.09
USF1P22415 AC080013.3-201ENST00000606839 578 ntBASIC2□□□□□ -2.09
USF1P22415 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2□□□□□ -2.09
USF1P22415 AC046143.2-201ENST00000609789 160 ntBASIC2□□□□□ -2.09
USF1P22415 AC097478.2-201ENST00000610572 514 ntBASIC2□□□□□ -2.09
USF1P22415 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2□□□□□ -2.09
USF1P22415 DUSP12P1-201ENST00000612874 516 ntBASIC2□□□□□ -2.09
USF1P22415 AC025594.3-201ENST00000613068 790 ntBASIC2□□□□□ -2.09
USF1P22415 AL136981.2-201ENST00000617319 734 ntBASIC2□□□□□ -2.09
USF1P22415 MIR4509-1-201ENST00000618224 94 ntBASIC2□□□□□ -2.09
USF1P22415 MIR6873-201ENST00000622788 63 ntBASIC2□□□□□ -2.09
USF1P22415 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2□□□□□ -2.09
USF1P22415 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2□□□□□ -2.09
USF1P22415 CU459211.1-201ENST00000635667 749 ntBASIC2□□□□□ -2.09
USF1P22415 MIR7157-201ENST00000635801 60 ntBASIC2□□□□□ -2.09
USF1P22415 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2□□□□□ -2.09
USF1P22415 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2□□□□□ -2.09
USF1P22415 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
USF1P22415 SNORA4.1-201ENST00000364263 144 ntBASIC1.99□□□□□ -2.09
USF1P22415 U8.8-201ENST00000365399 135 ntBASIC1.99□□□□□ -2.09
USF1P22415 AL139397.2-201ENST00000404529 772 ntBASIC1.99□□□□□ -2.09
USF1P22415 AC107081.1-201ENST00000414975 361 ntBASIC1.99□□□□□ -2.09
USF1P22415 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USF1P22415 GPM6BP2-201ENST00000432046 144 ntBASIC1.99□□□□□ -2.09
USF1P22415 AC098826.1-201ENST00000433943 471 ntBASIC1.99□□□□□ -2.09
USF1P22415 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.99□□□□□ -2.09
USF1P22415 AC005094.1-201ENST00000440420 368 ntBASIC1.99□□□□□ -2.09
USF1P22415 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.99□□□□□ -2.09
USF1P22415 IFNA11P-201ENST00000446352 526 ntBASIC1.99□□□□□ -2.09
USF1P22415 GPM6BP1-201ENST00000446387 144 ntBASIC1.99□□□□□ -2.09
USF1P22415 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
USF1P22415 FCF1P6-201ENST00000456841 595 ntBASIC1.99□□□□□ -2.09
USF1P22415 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
USF1P22415 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.99□□□□□ -2.09
USF1P22415 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.99□□□□□ -2.09
USF1P22415 MTCYBP43-201ENST00000513621 740 ntBASIC1.99□□□□□ -2.09
USF1P22415 SNORA31.6-201ENST00000516241 130 ntBASIC1.99□□□□□ -2.09
USF1P22415 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.99□□□□□ -2.09
USF1P22415 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.99□□□□□ -2.09
USF1P22415 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.99□□□□□ -2.09
USF1P22415 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.99□□□□□ -2.09
USF1P22415 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.99□□□□□ -2.09
USF1P22415 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.99□□□□□ -2.09
USF1P22415 DPPA3P3-201ENST00000603842 430 ntBASIC1.99□□□□□ -2.09
USF1P22415 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
USF1P22415 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.99□□□□□ -2.09
USF1P22415 AC009269.6-201ENST00000621778 588 ntBASIC1.99□□□□□ -2.09
USF1P22415 AL445984.1-201ENST00000637834 659 ntBASIC1.99□□□□□ -2.09
USF1P22415 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
USF1P22415 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
USF1P22415 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
USF1P22415 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USF1P22415 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.98□□□□□ -2.09
USF1P22415 AL596028.1-201ENST00000326971 197 ntBASIC1.98□□□□□ -2.09
USF1P22415 MIR620-201ENST00000385232 95 ntBASIC1.98□□□□□ -2.09
USF1P22415 AL021407.1-201ENST00000404531 386 ntBASIC1.98□□□□□ -2.09
USF1P22415 BTF3P7-201ENST00000407097 488 ntBASIC1.98□□□□□ -2.09
USF1P22415 RNU6-920P-201ENST00000410926 92 ntBASIC1.98□□□□□ -2.09
USF1P22415 AF274854.1-201ENST00000413236 615 ntBASIC1.98□□□□□ -2.09
USF1P22415 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.98□□□□□ -2.09
USF1P22415 USP9YP24-201ENST00000434374 697 ntBASIC1.98□□□□□ -2.09
USF1P22415 AL117351.1-201ENST00000438864 766 ntBASIC1.98□□□□□ -2.09
USF1P22415 MTND3P1-201ENST00000441336 220 ntBASIC1.98□□□□□ -2.09
USF1P22415 USP9YP17-201ENST00000444617 696 ntBASIC1.98□□□□□ -2.09
USF1P22415 PTENP1-201ENST00000447117 1215 ntBASIC1.98□□□□□ -2.09
USF1P22415 MTATP6P7-201ENST00000453315 681 ntBASIC1.98□□□□□ -2.09
USF1P22415 AL139109.1-201ENST00000455491 297 ntBASIC1.98□□□□□ -2.09
USF1P22415 AL049829.1-201ENST00000465411 156 ntBASIC1.98□□□□□ -2.09
USF1P22415 AL121769.1-201ENST00000469473 401 ntBASIC1.98□□□□□ -2.09
USF1P22415 RPL23AP49-201ENST00000492925 468 ntBASIC1.98□□□□□ -2.09
USF1P22415 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.98□□□□□ -2.09
USF1P22415 AC104090.1-201ENST00000506341 1171 ntBASIC1.98□□□□□ -2.09
USF1P22415 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
USF1P22415 SCARNA3-201ENST00000517097 143 ntBASIC1.98□□□□□ -2.09
USF1P22415 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.98□□□□□ -2.09
USF1P22415 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.98□□□□□ -2.09
USF1P22415 AC021739.1-201ENST00000559631 174 ntBASIC1.98□□□□□ -2.09
USF1P22415 RPS3AP23-202ENST00000574601 686 ntBASIC1.98□□□□□ -2.09
USF1P22415 MIR5571-201ENST00000577998 113 ntBASIC1.98□□□□□ -2.09
USF1P22415 MIR3199-1-201ENST00000582434 88 ntBASIC1.98□□□□□ -2.09
USF1P22415 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.98□□□□□ -2.09
USF1P22415 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC1.98□□□□□ -2.09
USF1P22415 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.98□□□□□ -2.09
USF1P22415 AL391001.1-201ENST00000602747 715 ntBASIC1.98□□□□□ -2.09
USF1P22415 AC072039.2-201ENST00000608883 439 ntBASIC1.98□□□□□ -2.09
USF1P22415 AL157392.4-201ENST00000609756 345 ntBASIC1.98□□□□□ -2.09
USF1P22415 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC1.98□□□□□ -2.09
USF1P22415 AC245884.12-201ENST00000615364 59 ntBASIC1.98□□□□□ -2.09
USF1P22415 AC012150.2-201ENST00000621300 544 ntBASIC1.98□□□□□ -2.09
USF1P22415 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
USF1P22415 AC092125.1-201ENST00000562568 1995 ntBASIC1.98□□□□□ -2.09
USF1P22415 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
USF1P22415 MTND5P30-201ENST00000452896 1731 ntBASIC1.97□□□□□ -2.09
USF1P22415 AC016717.2-201ENST00000609089 5141 ntBASIC1.97□□□□□ -2.09
USF1P22415 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.97□□□□□ -2.09
USF1P22415 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.97□□□□□ -2.09
USF1P22415 FAM133CP-201ENST00000332869 704 ntBASIC1.97□□□□□ -2.09
USF1P22415 RNU6-723P-201ENST00000383973 107 ntBASIC1.97□□□□□ -2.09
USF1P22415 RNU6-636P-201ENST00000384598 107 ntBASIC1.97□□□□□ -2.09
USF1P22415 RNU6-278P-201ENST00000390945 109 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms