Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 AC009097.3-201ENST00000563557 1018 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 MIR4765-201ENST00000585007 77 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 AC023043.3-201ENST00000593113 385 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 AL627309.6-201ENST00000606857 840 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 AC006338.1-201ENST00000618453 749 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 AC010149.2-201ENST00000637608 315 ntBASIC2.69□□□□□ -1.98
HLA-DPA1P20036 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.69□□□□□ -1.98
HLA-DPA1P20036 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 MTND5P30-201ENST00000452896 1731 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 Y_RNA.111-201ENST00000363248 100 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 RNA5SP393-201ENST00000363423 117 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 RNU6-188P-201ENST00000364207 107 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 RNY4P16-201ENST00000364768 94 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 RNU1-100P-201ENST00000365255 165 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 MIR592-201ENST00000384959 97 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 MIR147B-201ENST00000390185 80 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 USP9YP6-201ENST00000413550 854 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 SUMO1P4-201ENST00000429430 302 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 FABP5P14-201ENST00000437273 393 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 EEF1B2P7-201ENST00000451177 676 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 GSTA11P-201ENST00000452866 669 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 MTND2P14-201ENST00000482139 351 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 MTND1P3-201ENST00000484956 952 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 RN7SKP132-201ENST00000516001 208 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 RNU6-581P-201ENST00000516214 105 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 RNA5SP76-201ENST00000516277 87 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 RNU6-678P-201ENST00000516832 109 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 RNU6-1183P-201ENST00000517054 60 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 AC090136.1-201ENST00000520009 240 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 MTND4LP18-201ENST00000526864 291 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 OR5BN1P-201ENST00000532955 829 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 AC010186.2-204ENST00000537668 439 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 uc_338.14-201ENST00000613162 166 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 AL050303.3-201ENST00000613704 284 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 PISRT1-201ENST00000626175 531 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
HLA-DPA1P20036 AC092104.1-201ENST00000497346 1441 ntBASIC2.68□□□□□ -1.98
HLA-DPA1P20036 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 RNU6-1214P-201ENST00000363650 109 ntBASIC2.67□□□□□ -1.98
HLA-DPA1P20036 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 PTGES3P4-201ENST00000426243 356 ntBASIC2.67□□□□□ -1.98
HLA-DPA1P20036 Z98742.2-201ENST00000431564 187 ntBASIC2.67□□□□□ -1.98
HLA-DPA1P20036 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 BRK1P2-201ENST00000442875 223 ntBASIC2.67□□□□□ -1.98
HLA-DPA1P20036 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 AC004924.1-201ENST00000480160 781 ntBASIC2.67□□□□□ -1.98
HLA-DPA1P20036 RN7SL499P-201ENST00000481141 276 ntBASIC2.67□□□□□ -1.98
HLA-DPA1P20036 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.67□□□□□ -1.98
HLA-DPA1P20036 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 MIR4319-201ENST00000577285 85 ntBASIC2.67□□□□□ -1.98
HLA-DPA1P20036 MIR5571-201ENST00000577998 113 ntBASIC2.67□□□□□ -1.98
HLA-DPA1P20036 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 AC010678.1-201ENST00000614118 713 ntBASIC2.67□□□□□ -1.98
HLA-DPA1P20036 Z99571.1-201ENST00000636677 394 ntBASIC2.67□□□□□ -1.98
HLA-DPA1P20036 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.67□□□□□ -1.98
HLA-DPA1P20036 AC104454.1-201ENST00000421341 1401 ntBASIC2.67□□□□□ -1.98
HLA-DPA1P20036 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
HLA-DPA1P20036 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.66□□□□□ -1.98
HLA-DPA1P20036 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HLA-DPA1P20036 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
HLA-DPA1P20036 RNU6-511P-201ENST00000363496 107 ntBASIC2.66□□□□□ -1.98
HLA-DPA1P20036 SNORA72.3-201ENST00000365074 132 ntBASIC2.66□□□□□ -1.98
HLA-DPA1P20036 SMIM11P1-201ENST00000369586 178 ntBASIC2.66□□□□□ -1.98
HLA-DPA1P20036 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DPA1P20036 AC007064.1-201ENST00000412238 351 ntBASIC2.66□□□□□ -1.98
HLA-DPA1P20036 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.66□□□□□ -1.98
HLA-DPA1P20036 AL109913.1-201ENST00000421173 514 ntBASIC2.66□□□□□ -1.98
HLA-DPA1P20036 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DPA1P20036 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.66□□□□□ -1.98
HLA-DPA1P20036 AC118469.1-201ENST00000442943 488 ntBASIC2.66□□□□□ -1.98
HLA-DPA1P20036 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.66□□□□□ -1.98
HLA-DPA1P20036 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.66□□□□□ -1.98
HLA-DPA1P20036 AC092001.1-201ENST00000453012 261 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms