Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.76□□□□□ -2.29
HMGA1P17096 AC092436.3-201ENST00000511788 257 ntBASIC0.76□□□□□ -2.29
HMGA1P17096 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
HMGA1P17096 AC019288.1-201ENST00000557918 224 ntBASIC0.76□□□□□ -2.29
HMGA1P17096 AC018638.7-201ENST00000605836 1114 ntBASIC0.76□□□□□ -2.29
HMGA1P17096 AC027309.3-201ENST00000623419 351 ntBASIC0.76□□□□□ -2.29
HMGA1P17096 MIR6866-201ENST00000638146 69 ntBASIC0.76□□□□□ -2.29
HMGA1P17096 TPTE2P4-201ENST00000258589 1605 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 NACAP2-201ENST00000318548 624 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 SNORD26-201ENST00000384147 75 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 MIR598-201ENST00000384868 97 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC0.75□□□□□ -2.29
HMGA1P17096 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.75□□□□□ -2.29
HMGA1P17096 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.75□□□□□ -2.29
HMGA1P17096 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
HMGA1P17096 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.75□□□□□ -2.29
HMGA1P17096 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.75□□□□□ -2.29
HMGA1P17096 AL034418.1-201ENST00000448675 860 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.75□□□□□ -2.29
HMGA1P17096 AC139453.3-201ENST00000493276 369 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 RNU6-405P-201ENST00000516637 110 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 RNU6-467P-201ENST00000517027 110 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 AC104997.1-201ENST00000519761 717 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.75□□□□□ -2.29
HMGA1P17096 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.75□□□□□ -2.29
HMGA1P17096 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC0.75□□□□□ -2.29
HMGA1P17096 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.75□□□□□ -2.29
HMGA1P17096 AC133485.1-201ENST00000567176 124 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 AC138907.6-201ENST00000568401 126 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 MIR4713-201ENST00000582691 75 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.75□□□□□ -2.29
HMGA1P17096 BNIP3P25-201ENST00000596023 559 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.75□□□□□ -2.29
HMGA1P17096 MTCO2P22-201ENST00000603246 681 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
HMGA1P17096 AC090132.2-201ENST00000615881 347 ntBASIC0.75□□□□□ -2.29
HMGA1P17096 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.75□□□□□ -2.29
HMGA1P17096 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
HMGA1P17096 RNA5SP258-201ENST00000362750 119 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 U3.13-201ENST00000364804 214 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 MIR508-201ENST00000384857 115 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 MIR218-1-201ENST00000384999 110 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.74□□□□□ -2.29
HMGA1P17096 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC0.74□□□□□ -2.29
HMGA1P17096 MTCYBP29-201ENST00000436327 1006 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 AL691517.1-201ENST00000440833 1235 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 RNU6-1132P-201ENST00000459214 107 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 AP002371.1-201ENST00000463604 433 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 RPS15AP17-201ENST00000470598 390 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.74□□□□□ -2.29
HMGA1P17096 SNORA48.10-201ENST00000516965 160 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC0.74□□□□□ -2.29
HMGA1P17096 AC011260.1-201ENST00000578420 472 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 AC022202.1-201ENST00000613515 211 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 AP003399.1-201ENST00000637534 361 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 AC008163.1-202ENST00000636004 2889 ntBASIC0.74□□□□□ -2.29
HMGA1P17096 CBX3P1-201ENST00000325243 554 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 MT-TC-201ENST00000387405 66 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 AL356421.1-201ENST00000403255 413 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGA1P17096 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.73□□□□□ -2.29
HMGA1P17096 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC0.73□□□□□ -2.29
HMGA1P17096 AC021382.1-201ENST00000483523 359 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 AC147055.4-201ENST00000504399 745 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 MIR892C-201ENST00000516410 77 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 AC010186.2-204ENST00000537668 439 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 MIR3126-201ENST00000577443 74 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 AC021646.1-201ENST00000605469 484 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 AL020996.3-201ENST00000606617 222 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 DUSP12P1-201ENST00000612874 516 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 AC091925.2-201ENST00000625059 256 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 AC025048.6-202ENST00000627667 438 ntBASIC0.73□□□□□ -2.29
HMGA1P17096 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
HMGA1P17096 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
HMGA1P17096 SNORA8-201ENST00000384574 139 ntBASIC0.72□□□□□ -2.29
HMGA1P17096 RNA5SP212-201ENST00000391223 107 ntBASIC0.72□□□□□ -2.29
HMGA1P17096 PIGPP2-201ENST00000411569 458 ntBASIC0.72□□□□□ -2.29
HMGA1P17096 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC0.72□□□□□ -2.29
HMGA1P17096 RPS15AP38-201ENST00000413110 372 ntBASIC0.72□□□□□ -2.29
HMGA1P17096 MTCO3P4-201ENST00000419236 787 ntBASIC0.72□□□□□ -2.29
HMGA1P17096 AC234781.2-201ENST00000426370 994 ntBASIC0.72□□□□□ -2.29
HMGA1P17096 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC0.72□□□□□ -2.29
HMGA1P17096 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC0.72□□□□□ -2.29
HMGA1P17096 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.72□□□□□ -2.29
HMGA1P17096 AC004812.1-201ENST00000540773 146 ntBASIC0.72□□□□□ -2.29
HMGA1P17096 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.72□□□□□ -2.29
HMGA1P17096 IMMP1LP2-201ENST00000552954 492 ntBASIC0.72□□□□□ -2.29
HMGA1P17096 AL133241.1-201ENST00000556832 487 ntBASIC0.72□□□□□ -2.29
HMGA1P17096 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC0.72□□□□□ -2.29
HMGA1P17096 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC0.72□□□□□ -2.29
HMGA1P17096 AC073111.2-201ENST00000605657 1075 ntBASIC0.72□□□□□ -2.29
HMGA1P17096 Z99571.1-201ENST00000636677 394 ntBASIC0.72□□□□□ -2.29
HMGA1P17096 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.72□□□□□ -2.29
HMGA1P17096 AC010889.1-201ENST00000566193 2666 ntBASIC0.71□□□□□ -2.29
HMGA1P17096 AL513185.3-201ENST00000433335 1300 ntBASIC0.71□□□□□ -2.3
HMGA1P17096 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
HMGA1P17096 MIR424-201ENST00000362227 98 ntBASIC0.71□□□□□ -2.3
HMGA1P17096 MIR515-2-201ENST00000384883 83 ntBASIC0.71□□□□□ -2.3
HMGA1P17096 MIR515-1-201ENST00000384884 83 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms