Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HOXC4P09017 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
HOXC4P09017 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HOXC4P09017 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HOXC4P09017 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
HOXC4P09017 AL356473.1-201ENST00000406203 1408 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 XGY1-201ENST00000381172 446 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
HOXC4P09017 U8.14-201ENST00000390843 143 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 RNA5SP210-201ENST00000391034 120 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 RNU2-66P-201ENST00000410650 161 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 TPMTP2-201ENST00000414372 726 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.44□□□□□ -2.02
HOXC4P09017 MTATP6P27-201ENST00000416987 621 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 CCDC58P2-201ENST00000417131 366 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC4P09017 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC4P09017 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXC4P09017 AC005297.2-201ENST00000450430 606 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 AL353691.1-201ENST00000451332 387 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC4P09017 RPL23AP45-201ENST00000476406 468 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 RN7SL429P-201ENST00000479090 223 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 RN7SL489P-201ENST00000486185 223 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 RN7SL327P-201ENST00000488659 223 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 SRIP1-201ENST00000489235 288 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 AC090453.1-201ENST00000495560 436 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 AC114981.1-201ENST00000503897 678 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC4P09017 MTND2P33-201ENST00000506452 1031 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 ARL2BPP4-201ENST00000506854 471 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HOXC4P09017 RNU6-405P-201ENST00000516637 110 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXC4P09017 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC4P09017 AC027807.1-201ENST00000559921 996 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC4P09017 RPL23AP84-201ENST00000571193 464 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 MIR4528-201ENST00000577763 90 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 MIR5697-201ENST00000578045 78 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 MIR4446-201ENST00000578505 67 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC4P09017 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXC4P09017 AL136363.2-201ENST00000604173 851 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 BCRP9-201ENST00000605312 388 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 BX664608.1-201ENST00000610519 487 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.44□□□□□ -2.02
HOXC4P09017 AC013476.2-201ENST00000614456 459 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 AC025588.4-201ENST00000615802 908 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 RN7SL853P-201ENST00000617250 223 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HOXC4P09017 AL603839.4-201ENST00000624658 1005 ntBASIC2.44□□□□□ -2.02
HOXC4P09017 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.44□□□□□ -2.02
HOXC4P09017 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
HOXC4P09017 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HOXC4P09017 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.44□□□□□ -2.02
HOXC4P09017 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXC4P09017 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC4P09017 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC4P09017 RNU4-91P-201ENST00000364778 135 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 RNU5E-5P-201ENST00000365379 116 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 Y_RNA.516-201ENST00000384541 124 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 HMGB1P17-201ENST00000403495 628 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXC4P09017 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXC4P09017 RPS27AP14-201ENST00000422868 454 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXC4P09017 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXC4P09017 RPS3AP44-201ENST00000425466 790 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC007742.1-201ENST00000425789 329 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AL356583.2-201ENST00000426536 280 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 C8orf59P1-201ENST00000429930 303 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AL590233.1-201ENST00000430017 456 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 RPL37P21-201ENST00000435890 276 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 ELOCP26-201ENST00000436067 329 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC104389.3-201ENST00000445629 235 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC002381.1-201ENST00000447049 280 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.43□□□□□ -2.02
HOXC4P09017 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXC4P09017 AC073901.1-201ENST00000462471 408 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
HOXC4P09017 RPL31P60-201ENST00000478450 367 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC023424.2-201ENST00000493479 777 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXC4P09017 RPL37P25-201ENST00000507308 276 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC093809.1-201ENST00000509155 340 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC109464.2-201ENST00000510242 943 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AF213884.2-201ENST00000510417 903 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.43□□□□□ -2.02
HOXC4P09017 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXC4P09017 FABP5P5-201ENST00000515537 406 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXC4P09017 CASP1P1-201ENST00000526345 212 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AP004247.1-201ENST00000531556 1289 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.43□□□□□ -2.02
HOXC4P09017 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.43□□□□□ -2.02
HOXC4P09017 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.43□□□□□ -2.02
HOXC4P09017 OR4K8P-201ENST00000578842 1048 ntBASIC2.43□□□□□ -2.02
HOXC4P09017 MIR4307-201ENST00000582802 84 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms