Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 Y_RNA.279-201ENST00000364763 95 ntBASIC4.7□□□□□ -1.66
RAPGEF3O95398 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.7□□□□□ -1.66
RAPGEF3O95398 RNA5SP508-201ENST00000411327 119 ntBASIC4.7□□□□□ -1.66
RAPGEF3O95398 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.7□□□□□ -1.66
RAPGEF3O95398 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.7□□□□□ -1.66
RAPGEF3O95398 AL121877.1-201ENST00000453704 622 ntBASIC4.7□□□□□ -1.66
RAPGEF3O95398 AC010631.1-201ENST00000474150 156 ntBASIC4.7□□□□□ -1.66
RAPGEF3O95398 BTF3L4P4-201ENST00000506381 449 ntBASIC4.7□□□□□ -1.66
RAPGEF3O95398 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.7□□□□□ -1.66
RAPGEF3O95398 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.7□□□□□ -1.66
RAPGEF3O95398 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.7□□□□□ -1.66
RAPGEF3O95398 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.7□□□□□ -1.66
RAPGEF3O95398 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RAPGEF3O95398 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.7□□□□□ -1.66
RAPGEF3O95398 AC138761.3-201ENST00000579993 334 ntBASIC4.7□□□□□ -1.66
RAPGEF3O95398 AL022099.1-201ENST00000604551 712 ntBASIC4.7□□□□□ -1.66
RAPGEF3O95398 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.7□□□□□ -1.66
RAPGEF3O95398 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAPGEF3O95398 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RAPGEF3O95398 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RAPGEF3O95398 NACAP2-201ENST00000318548 624 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 Y_RNA.70-201ENST00000362886 110 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 SNORA62.1-201ENST00000364287 154 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RAPGEF3O95398 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RAPGEF3O95398 RNU6-76P-201ENST00000384060 104 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 RNU6-1181P-201ENST00000384191 106 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 SNORD15B-201ENST00000384714 146 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 RNU2-29P-201ENST00000410423 189 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 RNU2-41P-201ENST00000410991 178 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 RNU6-387P-201ENST00000411331 105 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 RPL36AP53-201ENST00000432891 316 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.69□□□□□ -1.66
RAPGEF3O95398 RPS24P13-201ENST00000442520 397 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 MTND1P18-201ENST00000448191 573 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.69□□□□□ -1.66
RAPGEF3O95398 AP002884.2-201ENST00000471647 395 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 UBL5P3-201ENST00000475112 231 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 RPS4XP13-201ENST00000483219 789 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 AC008628.2-201ENST00000502605 298 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.69□□□□□ -1.66
RAPGEF3O95398 AC090281.1-201ENST00000523019 276 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.69□□□□□ -1.66
RAPGEF3O95398 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RAPGEF3O95398 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RAPGEF3O95398 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.69□□□□□ -1.66
RAPGEF3O95398 ADI1P3-201ENST00000549509 470 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 OR4H12P-201ENST00000556269 907 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 AC104260.1-201ENST00000616660 539 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 AC233309.1-201ENST00000619522 751 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 U6.114-201ENST00000636407 96 ntBASIC4.69□□□□□ -1.66
RAPGEF3O95398 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RAPGEF3O95398 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC4.69□□□□□ -1.66
RAPGEF3O95398 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RAPGEF3O95398 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.68□□□□□ -1.66
RAPGEF3O95398 MIR22-201ENST00000362190 85 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 U3.12-201ENST00000364498 214 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 RNA5SP189-201ENST00000364920 115 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 RPL23AP48-201ENST00000406913 488 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC4.68□□□□□ -1.66
RAPGEF3O95398 USP9YP8-201ENST00000441913 500 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 SNRPEP8-201ENST00000442866 260 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 GAPDHP27-201ENST00000447427 1020 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.68□□□□□ -1.66
RAPGEF3O95398 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.68□□□□□ -1.66
RAPGEF3O95398 LRRC34P2-201ENST00000514850 553 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 RNA5SP503-201ENST00000517047 117 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 OR5AL2P-201ENST00000532185 920 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 AP004242.1-201ENST00000533701 349 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 AC007424.1-203ENST00000554613 687 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.68□□□□□ -1.66
RAPGEF3O95398 AL138976.2-201ENST00000563989 694 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.68□□□□□ -1.66
RAPGEF3O95398 SNRPGP15-201ENST00000600149 222 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.68□□□□□ -1.66
RAPGEF3O95398 RMST_9.1-201ENST00000619945 193 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC4.68□□□□□ -1.66
RAPGEF3O95398 AC243829.7-201ENST00000633081 225 ntBASIC4.68□□□□□ -1.66
RAPGEF3O95398 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.68□□□□□ -1.66
RAPGEF3O95398 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RAPGEF3O95398 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RAPGEF3O95398 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RAPGEF3O95398 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RAPGEF3O95398 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RAPGEF3O95398 Y_RNA.86-201ENST00000363020 111 ntBASIC4.67□□□□□ -1.66
RAPGEF3O95398 RNU6-797P-201ENST00000363101 109 ntBASIC4.67□□□□□ -1.66
RAPGEF3O95398 RNU6-629P-201ENST00000384061 103 ntBASIC4.67□□□□□ -1.66
RAPGEF3O95398 RNU6-1009P-201ENST00000390996 107 ntBASIC4.67□□□□□ -1.66
RAPGEF3O95398 RNU6-193P-201ENST00000410977 107 ntBASIC4.67□□□□□ -1.66
RAPGEF3O95398 MTCYBP8-201ENST00000422855 651 ntBASIC4.67□□□□□ -1.66
RAPGEF3O95398 MTCO1P39-201ENST00000426148 480 ntBASIC4.67□□□□□ -1.66
RAPGEF3O95398 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.67□□□□□ -1.66
RAPGEF3O95398 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC4.67□□□□□ -1.66
RAPGEF3O95398 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.67□□□□□ -1.66
RAPGEF3O95398 PMCHL2-203ENST00000457791 237 ntBASIC4.67□□□□□ -1.66
RAPGEF3O95398 RPS29P15-201ENST00000458329 171 ntBASIC4.67□□□□□ -1.66
RAPGEF3O95398 RPL39P36-201ENST00000490784 156 ntBASIC4.67□□□□□ -1.66
RAPGEF3O95398 AC078817.1-201ENST00000492623 435 ntBASIC4.67□□□□□ -1.66
RAPGEF3O95398 MTCO2P30-201ENST00000503662 364 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms