Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 HMGB1P27-201ENST00000431429 603 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK1BO75841 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK1BO75841 UBE2D3P1-201ENST00000436669 444 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK1BO75841 MTND3P1-201ENST00000441336 220 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 USP9YP8-201ENST00000441913 500 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 PTENP1-201ENST00000447117 1215 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AP000936.2-201ENST00000447151 681 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AC080013.2-201ENST00000460866 323 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK1BO75841 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.82□□□□□ -2.12
UPK1BO75841 SMURF2P1-201ENST00000514992 481 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 SNORA31.3-201ENST00000516029 96 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 RNA5SP216-201ENST00000516111 123 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 RNU2-44P-201ENST00000516795 194 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.82□□□□□ -2.12
UPK1BO75841 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC1.82□□□□□ -2.12
UPK1BO75841 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.82□□□□□ -2.12
UPK1BO75841 MTCYBP20-201ENST00000524239 1129 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK1BO75841 MRPS36P5-201ENST00000551909 298 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AL133241.1-201ENST00000556832 487 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK1BO75841 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK1BO75841 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.82□□□□□ -2.12
UPK1BO75841 MIR544B-201ENST00000582372 78 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AC068790.3-201ENST00000602988 553 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AL158042.1-201ENST00000605338 460 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 YPEL5P2-201ENST00000605553 359 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AC007619.2-201ENST00000605743 379 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AC011939.3-201ENST00000613686 466 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK1BO75841 AC012314.7-201ENST00000619693 93 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 U6.99-201ENST00000637524 83 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 MTND5P30-201ENST00000452896 1731 ntBASIC1.82□□□□□ -2.12
UPK1BO75841 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.82□□□□□ -2.12
UPK1BO75841 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.81□□□□□ -2.12
UPK1BO75841 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
UPK1BO75841 RNU1-148P-201ENST00000384472 162 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 MIR122-201ENST00000385044 85 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 MIR34B-201ENST00000385076 84 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
UPK1BO75841 U6atac.2-201ENST00000408644 118 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK1BO75841 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC1.81□□□□□ -2.12
UPK1BO75841 HMGN2P19-201ENST00000425149 265 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AC093106.2-201ENST00000428212 385 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 YME1L1P1-201ENST00000429435 297 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.81□□□□□ -2.12
UPK1BO75841 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK1BO75841 RPL23AP41-201ENST00000484754 458 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AC096576.1-201ENST00000489014 359 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
UPK1BO75841 AC134050.1-201ENST00000495088 933 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AC104090.1-201ENST00000506341 1171 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 RNA5SP200-201ENST00000516360 103 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK1BO75841 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.81□□□□□ -2.12
UPK1BO75841 AP006587.4-201ENST00000526053 529 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 DEFB108A-201ENST00000530110 222 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK1BO75841 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.81□□□□□ -2.12
UPK1BO75841 MIR3122-201ENST00000577243 73 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 BNIP3P23-201ENST00000599655 511 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AC006023.1-201ENST00000603944 259 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 RNU6-88P-201ENST00000606801 100 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AC046143.2-201ENST00000609789 160 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AL355472.4-201ENST00000610233 626 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 uc_338.14-201ENST00000613162 166 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AL161423.1-201ENST00000613700 262 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.81□□□□□ -2.12
UPK1BO75841 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AP002371.2-201ENST00000624450 503 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AP000720.1-201ENST00000625091 483 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 AC099654.9-201ENST00000637055 678 ntBASIC1.81□□□□□ -2.12
UPK1BO75841 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.81□□□□□ -2.12
UPK1BO75841 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
UPK1BO75841 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
UPK1BO75841 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.8□□□□□ -2.12
UPK1BO75841 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
UPK1BO75841 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.8□□□□□ -2.12
UPK1BO75841 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
UPK1BO75841 RNU6-486P-201ENST00000363116 107 ntBASIC1.8□□□□□ -2.12
UPK1BO75841 RNU6-433P-201ENST00000363216 104 ntBASIC1.8□□□□□ -2.12
UPK1BO75841 RNU6-188P-201ENST00000364207 107 ntBASIC1.8□□□□□ -2.12
UPK1BO75841 RNU6-14P-201ENST00000384630 106 ntBASIC1.8□□□□□ -2.12
UPK1BO75841 RNU6-278P-201ENST00000390945 109 ntBASIC1.8□□□□□ -2.12
UPK1BO75841 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.8□□□□□ -2.12
UPK1BO75841 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC1.8□□□□□ -2.12
UPK1BO75841 ZNF90P2-204ENST00000419323 1075 ntBASIC1.8□□□□□ -2.12
UPK1BO75841 RPS3AP44-201ENST00000425466 790 ntBASIC1.8□□□□□ -2.12
UPK1BO75841 AL592045.1-201ENST00000429867 352 ntBASIC1.8□□□□□ -2.12
UPK1BO75841 AC124916.1-201ENST00000444020 547 ntBASIC1.8□□□□□ -2.12
UPK1BO75841 USP9YP25-201ENST00000457708 443 ntBASIC1.8□□□□□ -2.12
UPK1BO75841 snoU109.3-201ENST00000459477 145 ntBASIC1.8□□□□□ -2.12
UPK1BO75841 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.8□□□□□ -2.12
UPK1BO75841 AC011005.2-201ENST00000487324 359 ntBASIC1.8□□□□□ -2.12
UPK1BO75841 AC106872.3-201ENST00000495104 446 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms