Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 TRBV1-201ENST00000476502 284 ntBASIC3.76□□□□□ -1.81
VPS4BO75351 RPL31P13-201ENST00000484151 370 ntBASIC3.76□□□□□ -1.81
VPS4BO75351 AC083904.1-201ENST00000487828 231 ntBASIC3.76□□□□□ -1.81
VPS4BO75351 TRBV12-2-201ENST00000489763 344 ntBASIC3.76□□□□□ -1.81
VPS4BO75351 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS4BO75351 AC005921.1-201ENST00000510589 286 ntBASIC3.76□□□□□ -1.81
VPS4BO75351 SNORA31.8-201ENST00000516327 108 ntBASIC3.76□□□□□ -1.81
VPS4BO75351 SCARNA15.2-201ENST00000516409 127 ntBASIC3.76□□□□□ -1.81
VPS4BO75351 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.76□□□□□ -1.81
VPS4BO75351 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VPS4BO75351 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.76□□□□□ -1.81
VPS4BO75351 AC026464.5-201ENST00000562497 722 ntBASIC3.76□□□□□ -1.81
VPS4BO75351 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.76□□□□□ -1.81
VPS4BO75351 AC005498.1-201ENST00000592125 465 ntBASIC3.76□□□□□ -1.81
VPS4BO75351 AC044792.1-201ENST00000593294 196 ntBASIC3.76□□□□□ -1.81
VPS4BO75351 AC243960.4-201ENST00000600532 288 ntBASIC3.76□□□□□ -1.81
VPS4BO75351 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS4BO75351 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS4BO75351 AC009093.8-201ENST00000641769 292 ntBASIC3.76□□□□□ -1.81
VPS4BO75351 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
VPS4BO75351 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS4BO75351 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.76□□□□□ -1.81
VPS4BO75351 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
VPS4BO75351 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.76□□□□□ -1.81
VPS4BO75351 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS4BO75351 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS4BO75351 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS4BO75351 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VPS4BO75351 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS4BO75351 FRG1CP-201ENST00000358464 769 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 Y_RNA.212-201ENST00000364177 102 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 SNORA73.2-201ENST00000364946 201 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 MIR199A2-201ENST00000385289 110 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 EIF4E2P1-201ENST00000393781 255 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 CISD1P1-201ENST00000393907 327 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AL138878.1-201ENST00000405131 347 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS4BO75351 BX682237.1-201ENST00000415016 335 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 RPL7P10-201ENST00000417407 739 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AL160275.3-201ENST00000423876 471 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AL591212.2-201ENST00000433923 257 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS4BO75351 NDUFA5P4-201ENST00000436704 385 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AC008264.1-201ENST00000447612 367 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 RPL23AP31-201ENST00000456160 467 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 snoU13.4-201ENST00000458916 104 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 RPL9P32-201ENST00000464118 620 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS4BO75351 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS4BO75351 APOOP4-201ENST00000513530 597 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 Y_RNA.675-201ENST00000516389 149 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 RN7SKP83-201ENST00000516512 178 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AC087369.1-201ENST00000520775 996 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AC093027.1-201ENST00000546698 429 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS4BO75351 AL137849.1-201ENST00000604767 169 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AL670379.4-201ENST00000605279 254 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.75□□□□□ -1.81
VPS4BO75351 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.75□□□□□ -1.81
VPS4BO75351 AL133216.2-202ENST00000634512 349 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 AL034408.1-202ENST00000636088 415 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.75□□□□□ -1.81
VPS4BO75351 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
VPS4BO75351 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VPS4BO75351 OTUD4P1-201ENST00000237841 3067 ntBASIC3.75□□□□□ -1.81
VPS4BO75351 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
VPS4BO75351 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS4BO75351 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS4BO75351 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4BO75351 RNU6-715P-201ENST00000365204 103 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 RNU6-393P-201ENST00000384475 107 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 SNORD70.1-201ENST00000391007 85 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 RN7SKP156-201ENST00000410308 342 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS4BO75351 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS4BO75351 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4BO75351 AC084198.1-201ENST00000477747 402 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 MTCO1P29-201ENST00000496868 288 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 TRBVA-201ENST00000498804 316 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AC104136.1-201ENST00000512969 394 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 RNU2-69P-201ENST00000516061 100 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 RNU6-189P-201ENST00000516120 101 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AC026403.1-201ENST00000518938 295 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS4BO75351 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS4BO75351 AC005668.1-201ENST00000571142 476 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS4BO75351 AC244505.7-201ENST00000599675 272 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS4BO75351 AC113139.1-201ENST00000605049 239 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 MIR15A-201ENST00000607334 83 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AL050343.2-201ENST00000607338 280 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AC103710.3-201ENST00000608157 948 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AC104237.2-201ENST00000612456 443 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AL442067.2-201ENST00000614033 363 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.74□□□□□ -1.81
VPS4BO75351 RMST_7.1-201ENST00000621935 268 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 AC099654.10-201ENST00000640395 161 ntBASIC3.74□□□□□ -1.81
VPS4BO75351 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms