Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.46□□□□□ -2.02
MSH4O15457 RPL31P41-201ENST00000477967 372 ntBASIC2.46□□□□□ -2.02
MSH4O15457 MTND2P14-201ENST00000482139 351 ntBASIC2.46□□□□□ -2.02
MSH4O15457 RPS29P20-201ENST00000489592 171 ntBASIC2.46□□□□□ -2.02
MSH4O15457 RPL9P6-201ENST00000492764 598 ntBASIC2.46□□□□□ -2.02
MSH4O15457 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
MSH4O15457 AIG1P1-201ENST00000503376 148 ntBASIC2.46□□□□□ -2.02
MSH4O15457 SEM1P1-201ENST00000506694 209 ntBASIC2.46□□□□□ -2.02
MSH4O15457 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.46□□□□□ -2.02
MSH4O15457 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.46□□□□□ -2.02
MSH4O15457 SCARNA16.3-201ENST00000516595 184 ntBASIC2.46□□□□□ -2.02
MSH4O15457 SNORA31.15-201ENST00000516771 132 ntBASIC2.46□□□□□ -2.02
MSH4O15457 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.46□□□□□ -2.02
MSH4O15457 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.46□□□□□ -2.02
MSH4O15457 AP003461.1-201ENST00000528866 78 ntBASIC2.46□□□□□ -2.02
MSH4O15457 DEFB108A-201ENST00000530110 222 ntBASIC2.46□□□□□ -2.02
MSH4O15457 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.46□□□□□ -2.02
MSH4O15457 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.46□□□□□ -2.02
MSH4O15457 AC005498.1-201ENST00000592125 465 ntBASIC2.46□□□□□ -2.02
MSH4O15457 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.46□□□□□ -2.02
MSH4O15457 AC018714.1-201ENST00000605028 208 ntBASIC2.46□□□□□ -2.02
MSH4O15457 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.46□□□□□ -2.02
MSH4O15457 AP000240.1-201ENST00000609910 452 ntBASIC2.46□□□□□ -2.02
MSH4O15457 AC008498.1-201ENST00000613012 531 ntBASIC2.46□□□□□ -2.02
MSH4O15457 MIR6873-201ENST00000622788 63 ntBASIC2.46□□□□□ -2.02
MSH4O15457 AC093591.3-201ENST00000634516 308 ntBASIC2.46□□□□□ -2.02
MSH4O15457 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.46□□□□□ -2.02
MSH4O15457 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
MSH4O15457 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
MSH4O15457 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.45□□□□□ -2.02
MSH4O15457 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
MSH4O15457 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.45□□□□□ -2.02
MSH4O15457 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
MSH4O15457 RNU6-1214P-201ENST00000363650 109 ntBASIC2.45□□□□□ -2.02
MSH4O15457 U8.14-201ENST00000390843 143 ntBASIC2.45□□□□□ -2.02
MSH4O15457 MIR888-201ENST00000401186 77 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AL023284.1-201ENST00000403956 276 ntBASIC2.45□□□□□ -2.02
MSH4O15457 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC2.45□□□□□ -2.02
MSH4O15457 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.45□□□□□ -2.02
MSH4O15457 NPM1P11-201ENST00000417106 855 ntBASIC2.45□□□□□ -2.02
MSH4O15457 USP9YP13-201ENST00000417797 480 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AC098592.1-201ENST00000419352 333 ntBASIC2.45□□□□□ -2.02
MSH4O15457 MTND2P9-201ENST00000422293 931 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.45□□□□□ -2.02
MSH4O15457 AC096638.1-201ENST00000444678 216 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AC108059.3-201ENST00000456388 214 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AC072039.1-201ENST00000477611 581 ntBASIC2.45□□□□□ -2.02
MSH4O15457 MRPS36P2-201ENST00000512569 299 ntBASIC2.45□□□□□ -2.02
MSH4O15457 RN7SKP265-201ENST00000516448 223 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AC025881.1-201ENST00000518851 512 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AC022634.1-201ENST00000520765 532 ntBASIC2.45□□□□□ -2.02
MSH4O15457 SUB1P1-201ENST00000524415 382 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AC087241.2-201ENST00000535801 324 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.45□□□□□ -2.02
MSH4O15457 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.45□□□□□ -2.02
MSH4O15457 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.45□□□□□ -2.02
MSH4O15457 AP001004.1-201ENST00000582468 324 ntBASIC2.45□□□□□ -2.02
MSH4O15457 MIR4293-201ENST00000584305 78 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AC234772.3-201ENST00000602277 528 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AC112187.2-201ENST00000604345 283 ntBASIC2.45□□□□□ -2.02
MSH4O15457 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.45□□□□□ -2.02
MSH4O15457 OR10AB1P-201ENST00000609613 938 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.45□□□□□ -2.02
MSH4O15457 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.45□□□□□ -2.02
MSH4O15457 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.45□□□□□ -2.02
MSH4O15457 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.45□□□□□ -2.02
MSH4O15457 AC026241.1-201ENST00000517873 2142 ntBASIC2.45□□□□□ -2.02
MSH4O15457 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
MSH4O15457 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
MSH4O15457 CR848007.1-201ENST00000442354 1699 ntBASIC2.44□□□□□ -2.02
MSH4O15457 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
MSH4O15457 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
MSH4O15457 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
MSH4O15457 PABPC1P9-201ENST00000426076 1612 ntBASIC2.44□□□□□ -2.02
MSH4O15457 RNY4P24-201ENST00000362735 96 ntBASIC2.44□□□□□ -2.02
MSH4O15457 RNU6-1167P-201ENST00000363227 94 ntBASIC2.44□□□□□ -2.02
MSH4O15457 SNORA64-201ENST00000384674 134 ntBASIC2.44□□□□□ -2.02
MSH4O15457 AC078974.1-201ENST00000411597 223 ntBASIC2.44□□□□□ -2.02
MSH4O15457 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.44□□□□□ -2.02
MSH4O15457 AL358075.3-201ENST00000426289 226 ntBASIC2.44□□□□□ -2.02
MSH4O15457 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.44□□□□□ -2.02
MSH4O15457 MTND1P28-201ENST00000435623 950 ntBASIC2.44□□□□□ -2.02
MSH4O15457 SNRPEP9-201ENST00000436794 238 ntBASIC2.44□□□□□ -2.02
MSH4O15457 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
MSH4O15457 AL606662.1-201ENST00000445763 553 ntBASIC2.44□□□□□ -2.02
MSH4O15457 AL513124.1-201ENST00000450410 614 ntBASIC2.44□□□□□ -2.02
MSH4O15457 AL118520.1-201ENST00000450770 291 ntBASIC2.44□□□□□ -2.02
MSH4O15457 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.44□□□□□ -2.02
MSH4O15457 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.44□□□□□ -2.02
MSH4O15457 MTCO1P42-201ENST00000457379 726 ntBASIC2.44□□□□□ -2.02
MSH4O15457 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
MSH4O15457 RPS29P21-201ENST00000496272 170 ntBASIC2.44□□□□□ -2.02
MSH4O15457 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.44□□□□□ -2.02
MSH4O15457 RN7SKP258-201ENST00000517151 304 ntBASIC2.44□□□□□ -2.02
MSH4O15457 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.44□□□□□ -2.02
MSH4O15457 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.44□□□□□ -2.02
MSH4O15457 ELOCP32-201ENST00000548625 324 ntBASIC2.44□□□□□ -2.02
MSH4O15457 ISCA1P3-201ENST00000577104 373 ntBASIC2.44□□□□□ -2.02
MSH4O15457 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.44□□□□□ -2.02
MSH4O15457 MIR3124-201ENST00000582636 67 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms