Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC0.71□□□□□ -2.3
CACNA1AO00555 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.71□□□□□ -2.3
CACNA1AO00555 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.71□□□□□ -2.3
CACNA1AO00555 RPS15AP11-201ENST00000594193 385 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 MIR6718-201ENST00000616153 80 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC0.71□□□□□ -2.3
CACNA1AO00555 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
CACNA1AO00555 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
CACNA1AO00555 RPL23AP47-201ENST00000408017 460 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.7□□□□□ -2.3
CACNA1AO00555 MRPS33P3-201ENST00000513456 322 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 RNU6-491P-201ENST00000516099 110 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 RNU6-1004P-201ENST00000516584 111 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 AC068714.1-201ENST00000559623 800 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 AK6-205ENST00000618980 483 ntTSL 2 BASIC0.7□□□□□ -2.3
CACNA1AO00555 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC0.7□□□□□ -2.3
CACNA1AO00555 MTND4P27-201ENST00000450813 1354 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 SNORD114-2-201ENST00000363953 78 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 RNU6-1180P-201ENST00000364935 107 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.7□□□□□ -2.3
CACNA1AO00555 NDUFB4P2-201ENST00000509515 391 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 OR5H4P-201ENST00000510851 923 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 AC112206.3-201ENST00000514578 389 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 RNY4-201ENST00000516507 96 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 RNU6-229P-201ENST00000516614 102 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 SNORD59.2-201ENST00000516873 68 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 SNORA31.23-201ENST00000517219 133 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 AC025857.1-201ENST00000525252 377 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 AC008269.2-201ENST00000561915 1105 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 LINC00557-201ENST00000563184 1279 ntBASIC0.7□□□□□ -2.3
CACNA1AO00555 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.7□□□□□ -2.3
CACNA1AO00555 RNU1-96P-201ENST00000364163 162 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
CACNA1AO00555 MTCO3P4-201ENST00000419236 787 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC0.69□□□□□ -2.3
CACNA1AO00555 AC004383.1-201ENST00000438135 289 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 HMGN2P10-201ENST00000448085 265 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.69□□□□□ -2.3
CACNA1AO00555 TRBV8-1-201ENST00000481590 279 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 RPS27P21-201ENST00000486977 252 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 RNU6-943P-201ENST00000516960 98 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 Y_RNA.711-201ENST00000516993 102 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.69□□□□□ -2.3
CACNA1AO00555 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.69□□□□□ -2.3
CACNA1AO00555 SNORA67.1-201ENST00000364749 141 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 RNU6-234P-201ENST00000365229 104 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 RPL23AP95-201ENST00000426806 265 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 NAP1L4P3-201ENST00000432820 1147 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 AL022578.1-201ENST00000439330 1433 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.69□□□□□ -2.3
CACNA1AO00555 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.69□□□□□ -2.3
CACNA1AO00555 CYP4A27P-201ENST00000567218 190 ntBASIC0.69□□□□□ -2.3
CACNA1AO00555 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC0.69□□□□□ -2.3
CACNA1AO00555 AL157700.1-201ENST00000561973 1432 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 RPL23AP32-201ENST00000395315 459 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CACNA1AO00555 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.68□□□□□ -2.3
CACNA1AO00555 RFESDP1-201ENST00000422350 461 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 SDAD1P3-201ENST00000427380 333 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.68□□□□□ -2.3
CACNA1AO00555 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.68□□□□□ -2.3
CACNA1AO00555 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.68□□□□□ -2.3
CACNA1AO00555 MTND2P17-201ENST00000550281 688 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC0.68□□□□□ -2.3
CACNA1AO00555 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CACNA1AO00555 TPTE2P4-201ENST00000258589 1605 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 RNU4-7P-201ENST00000364758 141 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 RNA5SP189-201ENST00000364920 115 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 AC098592.2-201ENST00000413158 265 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 MTCO3P46-201ENST00000425787 232 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
CACNA1AO00555 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC0.68□□□□□ -2.3
CACNA1AO00555 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CACNA1AO00555 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.68□□□□□ -2.3
CACNA1AO00555 AC023050.1-201ENST00000498198 304 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 SNORA48.11-201ENST00000517015 89 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 MIR5194-201ENST00000582634 120 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 AL161734.1-201ENST00000609720 557 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
CACNA1AO00555 MIR6866-201ENST00000638146 69 ntBASIC0.68□□□□□ -2.3
CACNA1AO00555 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
CACNA1AO00555 MTND4P34-201ENST00000572715 1371 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CACNA1AO00555 RNU4-67P-201ENST00000364569 141 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 RNU6-119P-201ENST00000364882 107 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 AC092745.2-202ENST00000411880 369 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 AC073464.3-201ENST00000422564 712 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 USP12PX-201ENST00000432383 1057 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.67□□□□□ -2.3
CACNA1AO00555 AC010627.1-201ENST00000503819 1294 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 HMGB3P17-201ENST00000504195 649 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 RNU4-77P-201ENST00000516692 156 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 SNORA76.2-201ENST00000517095 137 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 CYCSP26-201ENST00000534107 320 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CACNA1AO00555 AC084757.1-201ENST00000559987 490 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 SNORA46.1-201ENST00000391069 153 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 MTND4LP13-201ENST00000425022 298 ntBASIC0.67□□□□□ -2.3
CACNA1AO00555 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms