Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 LINC01347-201ENST00000417964 355 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 MRPL35P3-201ENST00000421557 364 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.84□□□□□ -2.27
HMGN4O00479 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.84□□□□□ -2.27
HMGN4O00479 UBE2V1P5-201ENST00000440070 405 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 RPS3AP22-201ENST00000488297 769 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC0.84□□□□□ -2.27
HMGN4O00479 ARL2BPP4-201ENST00000506854 471 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 RNU6-27P-201ENST00000516146 107 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC0.84□□□□□ -2.27
HMGN4O00479 NAP1L1P1-201ENST00000524793 1063 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC0.84□□□□□ -2.27
HMGN4O00479 OR8K4P-201ENST00000534608 872 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 IMMP1LP2-201ENST00000552954 492 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 AC074051.3-201ENST00000570238 358 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 AC098848.2-201ENST00000588023 330 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 AP000403.1-201ENST00000603349 851 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 AC018638.7-201ENST00000605836 1114 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 AC006213.4-201ENST00000616184 634 ntBASIC0.84□□□□□ -2.27
HMGN4O00479 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.84□□□□□ -2.28
HMGN4O00479 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.84□□□□□ -2.28
HMGN4O00479 MTND5P31-201ENST00000419366 1374 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 RNU6-392P-201ENST00000364926 101 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 SNORD82-201ENST00000365530 70 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 SNORA40.19-201ENST00000390846 128 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 VTA1P1-201ENST00000414044 866 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 AC007742.1-201ENST00000425789 329 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 ELOCP26-201ENST00000436067 329 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 AC009238.1-201ENST00000442165 424 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 AC009237.6-201ENST00000446969 424 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 AC015724.1-201ENST00000478577 156 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.83□□□□□ -2.28
HMGN4O00479 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC0.83□□□□□ -2.28
HMGN4O00479 SNORA44.1-201ENST00000517031 108 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.83□□□□□ -2.28
HMGN4O00479 OR5AK1P-201ENST00000524837 922 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 AP002748.2-201ENST00000528671 348 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGN4O00479 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.83□□□□□ -2.28
HMGN4O00479 AL138963.2-201ENST00000605137 226 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 AC080013.4-201ENST00000607624 649 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGN4O00479 AC008443.7-201ENST00000622195 246 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 AC091925.2-201ENST00000625059 256 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGN4O00479 AP000776.1-201ENST00000530032 1663 ntBASIC0.83□□□□□ -2.28
HMGN4O00479 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
HMGN4O00479 MTND5P30-201ENST00000452896 1731 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 RNU6-670P-201ENST00000364312 104 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 RNA5SP465-201ENST00000391195 109 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 Y_RNA.595-201ENST00000410403 105 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 EIF4EP2-201ENST00000422816 654 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 AC092047.1-201ENST00000424997 240 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.82□□□□□ -2.28
HMGN4O00479 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC0.82□□□□□ -2.28
HMGN4O00479 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC0.82□□□□□ -2.28
HMGN4O00479 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.82□□□□□ -2.28
HMGN4O00479 MTND2P29-201ENST00000438595 412 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 AC092473.1-201ENST00000441098 221 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 PIGFP3-201ENST00000441918 722 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 PTENP1-201ENST00000447117 1215 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGN4O00479 HMGN3P1-201ENST00000453847 193 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 RPS20P22-201ENST00000473700 357 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 AC006390.1-201ENST00000508068 283 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.82□□□□□ -2.28
HMGN4O00479 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGN4O00479 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGN4O00479 CARD18-203ENST00000532895 422 ntTSL 2 BASIC0.82□□□□□ -2.28
HMGN4O00479 AC079148.1-201ENST00000565944 819 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGN4O00479 AL359821.1-201ENST00000605519 182 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC0.82□□□□□ -2.28
HMGN4O00479 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC0.82□□□□□ -2.28
HMGN4O00479 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.82□□□□□ -2.28
HMGN4O00479 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.82□□□□□ -2.28
HMGN4O00479 AC005832.2-201ENST00000538921 1430 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 RNU6-217P-201ENST00000384164 104 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 RNU6-921P-201ENST00000384361 107 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 RPS24P7-201ENST00000416921 246 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 SFR1P2-201ENST00000421841 730 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.81□□□□□ -2.28
HMGN4O00479 AC244505.5-201ENST00000443639 207 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 AP1S2P1-201ENST00000457344 379 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.81□□□□□ -2.28
HMGN4O00479 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.81□□□□□ -2.28
HMGN4O00479 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.81□□□□□ -2.28
HMGN4O00479 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC0.81□□□□□ -2.28
HMGN4O00479 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC0.81□□□□□ -2.28
HMGN4O00479 AC007349.4-201ENST00000608114 532 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 AC021851.1-201ENST00000608537 1082 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 AL121652.1-201ENST00000608851 448 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 AC024581.2-201ENST00000619986 252 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 AL589994.2-201ENST00000621124 579 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 AL356585.4-201ENST00000623078 1229 ntBASIC0.81□□□□□ -2.28
HMGN4O00479 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.81□□□□□ -2.28
HMGN4O00479 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HMGN4O00479 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.8□□□□□ -2.28
HMGN4O00479 AC010889.1-201ENST00000566193 2666 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms