Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC009878.1-201ENST00000621819 340 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AC078883.4-201ENST00000623218 367 ntBASIC2.57□□□□□ -2
PDLIM1O00151 AC091953.2-201ENST00000623979 160 ntBASIC2.57□□□□□ -2
PDLIM1O00151 MIR203B-201ENST00000636080 86 ntBASIC2.57□□□□□ -2
PDLIM1O00151 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.57□□□□□ -2
PDLIM1O00151 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
PDLIM1O00151 AL359693.1-201ENST00000614959 2407 ntBASIC2.56□□□□□ -2
PDLIM1O00151 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PDLIM1O00151 GNG5P1-201ENST00000255500 204 ntBASIC2.56□□□□□ -2
PDLIM1O00151 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
PDLIM1O00151 FTLP6-201ENST00000355274 422 ntBASIC2.56□□□□□ -2
PDLIM1O00151 MIR26A1-201ENST00000362205 77 ntBASIC2.56□□□□□ -2
PDLIM1O00151 RNU6-1167P-201ENST00000363227 94 ntBASIC2.56□□□□□ -2
PDLIM1O00151 MT-TH-201ENST00000387441 69 ntBASIC2.56□□□□□ -2
PDLIM1O00151 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.56□□□□□ -2
PDLIM1O00151 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.56□□□□□ -2
PDLIM1O00151 EEF1A1P41-201ENST00000414667 207 ntBASIC2.56□□□□□ -2
PDLIM1O00151 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.56□□□□□ -2
PDLIM1O00151 AC019097.1-201ENST00000424783 735 ntBASIC2.56□□□□□ -2
PDLIM1O00151 AC022018.1-201ENST00000430685 241 ntBASIC2.56□□□□□ -2
PDLIM1O00151 AC010153.1-201ENST00000432862 727 ntBASIC2.56□□□□□ -2
PDLIM1O00151 AC119618.1-201ENST00000434191 222 ntBASIC2.56□□□□□ -2
PDLIM1O00151 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM1O00151 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM1O00151 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM1O00151 AL031659.1-201ENST00000447075 539 ntBASIC2.56□□□□□ -2
PDLIM1O00151 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM1O00151 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM1O00151 AC087588.1-201ENST00000462203 316 ntBASIC2.56□□□□□ -2
PDLIM1O00151 BET1P1-201ENST00000482276 359 ntBASIC2.56□□□□□ -2
PDLIM1O00151 RPS3AP14-201ENST00000483907 780 ntBASIC2.56□□□□□ -2
PDLIM1O00151 RPS15AP34-201ENST00000487776 387 ntBASIC2.56□□□□□ -2
PDLIM1O00151 AC097462.2-201ENST00000504623 481 ntBASIC2.56□□□□□ -2
PDLIM1O00151 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
PDLIM1O00151 RNA5SP471-201ENST00000516971 106 ntBASIC2.56□□□□□ -2
PDLIM1O00151 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM1O00151 MRPS36P5-201ENST00000551909 298 ntBASIC2.56□□□□□ -2
PDLIM1O00151 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.56□□□□□ -2
PDLIM1O00151 EIF4BP1-201ENST00000554881 351 ntBASIC2.56□□□□□ -2
PDLIM1O00151 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.56□□□□□ -2
PDLIM1O00151 AC011471.1-201ENST00000585766 187 ntBASIC2.56□□□□□ -2
PDLIM1O00151 AC112191.3-201ENST00000604371 277 ntBASIC2.56□□□□□ -2
PDLIM1O00151 AL160281.1-201ENST00000605307 311 ntBASIC2.56□□□□□ -2
PDLIM1O00151 FRG1KP-201ENST00000623592 341 ntBASIC2.56□□□□□ -2
PDLIM1O00151 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.56□□□□□ -2
PDLIM1O00151 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.56□□□□□ -2
PDLIM1O00151 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.55□□□□□ -2
PDLIM1O00151 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.55□□□□□ -2
PDLIM1O00151 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
PDLIM1O00151 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
PDLIM1O00151 NDUFB4P4-201ENST00000404822 243 ntBASIC2.55□□□□□ -2
PDLIM1O00151 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.55□□□□□ -2
PDLIM1O00151 RAC1P6-201ENST00000423911 575 ntBASIC2.55□□□□□ -2
PDLIM1O00151 RPL7P37-201ENST00000425095 738 ntBASIC2.55□□□□□ -2
PDLIM1O00151 AC104651.1-201ENST00000427559 735 ntBASIC2.55□□□□□ -2
PDLIM1O00151 MTATP6P17-201ENST00000431030 672 ntBASIC2.55□□□□□ -2
PDLIM1O00151 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.55□□□□□ -2
PDLIM1O00151 MTND4P4-201ENST00000439033 1366 ntBASIC2.55□□□□□ -2
PDLIM1O00151 RPS12P2-201ENST00000439728 269 ntBASIC2.55□□□□□ -2
PDLIM1O00151 AL714022.1-201ENST00000439897 151 ntBASIC2.55□□□□□ -2
PDLIM1O00151 MTND1P26-201ENST00000440488 538 ntBASIC2.55□□□□□ -2
PDLIM1O00151 AC009296.1-201ENST00000443146 155 ntBASIC2.55□□□□□ -2
PDLIM1O00151 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM1O00151 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM1O00151 RNU7-23P-201ENST00000459465 62 ntBASIC2.55□□□□□ -2
PDLIM1O00151 AC116337.2-201ENST00000477662 156 ntBASIC2.55□□□□□ -2
PDLIM1O00151 AC109486.1-201ENST00000486833 374 ntBASIC2.55□□□□□ -2
PDLIM1O00151 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM1O00151 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM1O00151 AP003181.2-201ENST00000528941 181 ntBASIC2.55□□□□□ -2
PDLIM1O00151 AC022878.1-201ENST00000530684 149 ntBASIC2.55□□□□□ -2
PDLIM1O00151 AC007834.2-201ENST00000536310 343 ntBASIC2.55□□□□□ -2
PDLIM1O00151 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.55□□□□□ -2
PDLIM1O00151 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.55□□□□□ -2
PDLIM1O00151 MIR548AB-201ENST00000584917 84 ntBASIC2.55□□□□□ -2
PDLIM1O00151 AC012065.4-201ENST00000602445 679 ntBASIC2.55□□□□□ -2
PDLIM1O00151 FTX_3.1-201ENST00000610451 147 ntBASIC2.55□□□□□ -2
PDLIM1O00151 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.55□□□□□ -2
PDLIM1O00151 AC019226.2-201ENST00000625973 424 ntBASIC2.55□□□□□ -2
PDLIM1O00151 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.55□□□□□ -2
PDLIM1O00151 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.55□□□□□ -2
PDLIM1O00151 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.54□□□□□ -2
PDLIM1O00151 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.54□□□□□ -2
PDLIM1O00151 RNU6-884P-201ENST00000363889 107 ntBASIC2.54□□□□□ -2
PDLIM1O00151 RNU6-512P-201ENST00000364438 103 ntBASIC2.54□□□□□ -2
PDLIM1O00151 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
PDLIM1O00151 Y_RNA.598-201ENST00000410480 95 ntBASIC2.54□□□□□ -2
PDLIM1O00151 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.54□□□□□ -2
PDLIM1O00151 AL358075.3-201ENST00000426289 226 ntBASIC2.54□□□□□ -2
PDLIM1O00151 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.54□□□□□ -2
PDLIM1O00151 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.54□□□□□ -2
PDLIM1O00151 RPS20P5-201ENST00000434808 360 ntBASIC2.54□□□□□ -2
PDLIM1O00151 MTND4P25-201ENST00000441039 533 ntBASIC2.54□□□□□ -2
PDLIM1O00151 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.54□□□□□ -2
PDLIM1O00151 AL135938.1-201ENST00000443141 297 ntBASIC2.54□□□□□ -2
PDLIM1O00151 NEFMP1-201ENST00000443423 1006 ntBASIC2.54□□□□□ -2
PDLIM1O00151 RPS15AP27-201ENST00000449183 343 ntBASIC2.54□□□□□ -2
PDLIM1O00151 NIPA2P5-201ENST00000452282 464 ntBASIC2.54□□□□□ -2
PDLIM1O00151 CECR9-201ENST00000453421 199 ntBASIC2.54□□□□□ -2
PDLIM1O00151 SNORD97-201ENST00000459187 142 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms