Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 AL049641.1-201ENST00000441055 1948 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 AC004944.1-201ENST00000517807 3059 ntBASIC2.7□□□□□ -1.98
NEDD8-MDP1E9PL57 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU5E-1-201ENST00000362477 120 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 SNORA40.3-201ENST00000390964 122 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AL445529.1-201ENST00000398713 389 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU2-36P-201ENST00000410361 191 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 RNA5SP492-201ENST00000411330 114 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 USP9YP29-201ENST00000445112 563 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AL513328.1-201ENST00000446460 224 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AL033528.1-201ENST00000453780 140 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU6-420P-201ENST00000458780 107 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 RPL30P14-201ENST00000482744 348 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 SRIP1-201ENST00000489235 288 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU6-927P-201ENST00000516199 100 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 Y_RNA.672-201ENST00000516289 104 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 Y_RNA.695-201ENST00000516715 107 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AP006587.4-201ENST00000526053 529 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 TRAV28-201ENST00000557548 323 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 PIGPP4-201ENST00000584447 307 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AC073544.2-201ENST00000601155 540 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 DUXAP4-201ENST00000603046 613 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 DPPA3P3-201ENST00000603842 430 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 AC135507.1-201ENST00000607214 561 ntBASIC2.69□□□□□ -1.98
NEDD8-MDP1E9PL57 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 MIR181B1-201ENST00000385240 110 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 RNA5SP252-201ENST00000391131 119 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 RPL19P1-201ENST00000411635 428 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 RPLP0P7-201ENST00000416050 667 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 ZNF90P2-204ENST00000419323 1075 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 RPS15AP12-201ENST00000419498 388 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AL590383.1-201ENST00000428602 75 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AC009961.2-201ENST00000435771 251 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 USP9YP15-201ENST00000442391 422 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 GAPDHP17-201ENST00000449858 1001 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 RPL23AP11-201ENST00000475260 469 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 RBM43P1-201ENST00000476891 1081 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 RN7SL429P-201ENST00000479090 223 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 RN7SL489P-201ENST00000486185 223 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 RN7SL327P-201ENST00000488659 223 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 MTND5P13-201ENST00000513046 1079 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 HSPE1P20-201ENST00000538133 289 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AC128657.1-201ENST00000549459 145 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 MIR3609-201ENST00000582661 80 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AC119751.7-201ENST00000600494 245 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AC087752.4-201ENST00000605911 462 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 RN7SL853P-201ENST00000617250 223 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 AC108479.2-201ENST00000617314 601 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 MIR6733-201ENST00000635723 61 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 OR5H6-203ENST00000642105 978 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 TEX21P-201ENST00000447107 1476 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 TPTE2P4-201ENST00000258589 1605 ntBASIC2.68□□□□□ -1.98
NEDD8-MDP1E9PL57 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU5E-6P-201ENST00000365574 115 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU6-741P-201ENST00000383889 107 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 RPL23AP32-201ENST00000395315 459 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 NDUFS5P1-201ENST00000405668 289 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 RNU2-33P-201ENST00000410344 192 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 RNA5SP508-201ENST00000411327 119 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 SEPT2P1-201ENST00000419651 180 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AC007283.2-201ENST00000424739 197 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 SAR1AP4-201ENST00000429225 591 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AL512844.2-201ENST00000433990 593 ntBASIC2.67□□□□□ -1.98
NEDD8-MDP1E9PL57 AC104850.1-201ENST00000435940 476 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms