Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 MIR506-201ENST00000384998 124 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AL135790.2-201ENST00000437701 267 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 SNRPEP7-201ENST00000438350 220 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AL035666.1-201ENST00000446195 348 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC0.35□□□□□ -2.35
LINC01549A6NIU2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AC119751.5-201ENST00000514077 770 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AC104997.1-201ENST00000519761 717 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.35□□□□□ -2.35
LINC01549A6NIU2 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AC233266.2-201ENST00000567067 528 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AC012414.6-201ENST00000568241 401 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AL356432.3-201ENST00000568952 465 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 RN7SL622P-201ENST00000585292 275 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AC090525.3-201ENST00000605601 189 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.35□□□□□ -2.35
LINC01549A6NIU2 STMN1P1-201ENST00000617809 440 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.35□□□□□ -2.35
LINC01549A6NIU2 AC008443.7-201ENST00000622195 246 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.35□□□□□ -2.35
LINC01549A6NIU2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.35□□□□□ -2.35
LINC01549A6NIU2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.34□□□□□ -2.35
LINC01549A6NIU2 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
LINC01549A6NIU2 MIR378A-201ENST00000362177 66 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC0.34□□□□□ -2.36
LINC01549A6NIU2 SNORA18.2-201ENST00000383865 132 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 SNORA11-201ENST00000408789 128 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC069282.1-201ENST00000411911 526 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.34□□□□□ -2.36
LINC01549A6NIU2 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.34□□□□□ -2.36
LINC01549A6NIU2 ZNF863P-201ENST00000426746 417 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC092473.1-201ENST00000441098 221 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 CALM1P1-201ENST00000442082 433 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC009238.1-201ENST00000442165 424 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC009237.6-201ENST00000446969 424 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AL589880.1-201ENST00000448271 287 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC114982.1-201ENST00000469402 321 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC0.34□□□□□ -2.36
LINC01549A6NIU2 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.34□□□□□ -2.36
LINC01549A6NIU2 ARL2BPP4-201ENST00000506854 471 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.34□□□□□ -2.36
LINC01549A6NIU2 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.34□□□□□ -2.36
LINC01549A6NIU2 SNORD116-28-201ENST00000516123 91 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC005832.2-201ENST00000538921 1430 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC133485.1-201ENST00000567176 124 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC138907.6-201ENST00000568401 126 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 MIR3973-201ENST00000579824 107 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC105245.1-201ENST00000581934 244 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AP003973.1-201ENST00000604639 691 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC013412.1-201ENST00000610687 192 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AL391597.1-201ENST00000618707 694 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 AC241585.2-209ENST00000638217 143 ntBASIC0.34□□□□□ -2.36
LINC01549A6NIU2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC0.34□□□□□ -2.36
LINC01549A6NIU2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.33□□□□□ -2.36
LINC01549A6NIU2 AC138393.1-203ENST00000327086 343 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 SNORA4.1-201ENST00000364263 144 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 MIR508-201ENST00000384857 115 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 AC097463.2-201ENST00000421074 142 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 AC233981.1-201ENST00000423224 461 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 UBE2V1P4-201ENST00000425374 344 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 AL353691.1-201ENST00000451332 387 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC0.33□□□□□ -2.36
LINC01549A6NIU2 RAP1BP2-201ENST00000478270 544 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 AC008676.3-201ENST00000521237 435 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 AC025423.2-201ENST00000537570 439 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 AC011611.5-201ENST00000552477 578 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.33□□□□□ -2.36
LINC01549A6NIU2 AL359212.1-201ENST00000556608 614 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 CYP4A27P-201ENST00000567218 190 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 AC080078.3-201ENST00000605407 463 ntBASIC0.33□□□□□ -2.36
LINC01549A6NIU2 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.32□□□□□ -2.36
LINC01549A6NIU2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
LINC01549A6NIU2 MIR520E-201ENST00000384867 87 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 MIR10B-201ENST00000385011 110 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 SNORA17.3-201ENST00000391159 129 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 AGR3-202ENST00000402239 563 ntTSL 2 BASIC0.32□□□□□ -2.36
LINC01549A6NIU2 MIR1261-201ENST00000408659 82 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 AC099548.1-201ENST00000421443 426 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.32□□□□□ -2.36
LINC01549A6NIU2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.32□□□□□ -2.36
LINC01549A6NIU2 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC0.32□□□□□ -2.36
LINC01549A6NIU2 snoU13.9-201ENST00000458927 103 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 AC111000.5-201ENST00000506559 1178 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.32□□□□□ -2.36
LINC01549A6NIU2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.32□□□□□ -2.36
LINC01549A6NIU2 HMGN2P15-201ENST00000585707 270 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 AP000254.1-201ENST00000609934 520 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 MIR8074-201ENST00000615081 81 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 DLEU1_2.1-201ENST00000617920 342 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 AC099063.3-201ENST00000642066 185 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 AC134026.1-201ENST00000623249 2239 ntBASIC0.32□□□□□ -2.36
LINC01549A6NIU2 RNU6-271P-201ENST00000363858 105 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 RNU6-968P-201ENST00000384076 107 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 AL136372.1-201ENST00000403060 228 ntBASIC0.31□□□□□ -2.36
LINC01549A6NIU2 U6atac.2-201ENST00000408644 118 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 134.6 ms